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Aliases for TRR-TCT1-1 Gene

Subcategory (RNA class) for TRR-TCT1-1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for TRR-TCT1-1 Gene

  • Transfer RNA-Arg (TCT) 1-1 2 3
  • Transfer RNA Arginine 15 (Anticodon UCU) 2 3
  • RP4-561L24.3 5
  • TRNAR15 3

External Ids for TRR-TCT1-1 Gene

Previous HGNC Symbols for TRR-TCT1-1 Gene

  • TRNAR15

Summaries for TRR-TCT1-1 Gene

GeneCards Summary for TRR-TCT1-1 Gene

TRR-TCT1-1 (Transfer RNA-Arg (TCT) 1-1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRR-TCT1-1 Gene

Genomics for TRR-TCT1-1 Gene

Regulatory Elements for TRR-TCT1-1 Gene

Enhancers for TRR-TCT1-1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G093811 1.6 Ensembl ENCODE dbSUPER 29.3 -32.1 -32061 8.0 PKNOX1 WRNIP1 ZFP64 ARID4B SIN3A FEZF1 ZNF2 ZNF143 ZNF207 DEK ENSG00000230439 SNORD21 TRR-TCT1-1 RPL5 SNORA66 CCDC18-AS1 DNTTIP2 BCAR3 MIR760 GCLM
GH01G093773 1.9 FANTOM5 Ensembl ENCODE dbSUPER 17.1 -69.1 -69069 9.5 FOXA2 ARID4B SIN3A DMAP1 FEZF1 ZNF416 FOS ZNF263 SP3 SP5 ENSG00000230439 TRR-TCT1-1 BCAR3 LOC100129046 GCLM ARHGAP29 FNBP1L GC01M093783
GH01G093078 1.2 ENCODE 21.4 -766.7 -766739 4.5 MLX CREB3L1 ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF416 ZNF143 ZNF548 CCDC18-AS1 SNORA66 SNORD21 TRR-TCT1-1 RPL5 KIAA1107 DNTTIP2 CCDC18 TMED5 RPAP2
GH01G094232 1.9 FANTOM5 Ensembl ENCODE dbSUPER 12.9 +389.5 389490 7.4 PKNOX1 FOXA2 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 FOS ZNF263 CCDC18-AS1 LOC107985092 TRR-TCT1-1 ABCA4 ARHGAP29 ABCD3 GC01M094182
GH01G092975 1.5 FANTOM5 ENCODE dbSUPER 14.7 -870.8 -870765 5.3 HDGF ATF1 PKNOX1 MLX ZFP64 E2F7 TCF12 ZNF121 ZNF766 GATA2 RPL5 TRR-TCT1-1 DNTTIP2 ENSG00000230439 MTF2 EVI5 KIAA1107 SNORD21 FAM69A CCDC18-AS1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRR-TCT1-1 on UCSC Golden Path with GeneCards custom track

Promoters for TRR-TCT1-1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000010020 126 2600 CREB3L1 ZFP64 DMAP1 YY1 SLC30A9 ZNF143 SP3 ZNF610 GLIS1 RCOR2

Genomic Location for TRR-TCT1-1 Gene

Chromosome:
1
Start:
93,847,174 bp from pter
End:
93,848,939 bp from pter
Size:
1,766 bases
Orientation:
Plus strand

Genomic View for TRR-TCT1-1 Gene

Genes around TRR-TCT1-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRR-TCT1-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRR-TCT1-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRR-TCT1-1 Gene

Proteins for TRR-TCT1-1 Gene

Post-translational modifications for TRR-TCT1-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRR-TCT1-1 Gene

Domains & Families for TRR-TCT1-1 Gene

Gene Families for TRR-TCT1-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRR-TCT1-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRR-TCT1-1 Gene

Function for TRR-TCT1-1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRR-TCT1-1 Gene

Localization for TRR-TCT1-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRR-TCT1-1 Gene

Pathways & Interactions for TRR-TCT1-1 Gene

SuperPathways for TRR-TCT1-1 Gene

No Data Available

Interacting Proteins for TRR-TCT1-1 Gene

Gene Ontology (GO) - Biological Process for TRR-TCT1-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRR-TCT1-1 Gene

Drugs & Compounds for TRR-TCT1-1 Gene

No Compound Related Data Available

Transcripts for TRR-TCT1-1 Gene

mRNA/cDNA for TRR-TCT1-1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TRR-TCT1-1 Gene

No ASD Table

Relevant External Links for TRR-TCT1-1 Gene

GeneLoc Exon Structure for
TRR-TCT1-1
ECgene alternative splicing isoforms for
TRR-TCT1-1

Expression for TRR-TCT1-1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TRR-TCT1-1 Gene

genes like me logo Genes that share expression patterns with TRR-TCT1-1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRR-TCT1-1 Gene

Orthologs for TRR-TCT1-1 Gene

Evolution for TRR-TCT1-1 Gene

ENSEMBL:
Gene Tree for TRR-TCT1-1 (if available)
TreeFam:
Gene Tree for TRR-TCT1-1 (if available)

No data available for Orthologs for TRR-TCT1-1 Gene

Paralogs for TRR-TCT1-1 Gene

No data available for Paralogs for TRR-TCT1-1 Gene

Variants for TRR-TCT1-1 Gene

Relevant External Links for TRR-TCT1-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRR-TCT1-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRR-TCT1-1 Gene

Disorders for TRR-TCT1-1 Gene

No disorders were found for TRR-TCT1-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRR-TCT1-1 Gene

Publications for TRR-TCT1-1 Gene

No publications were found for TRR-TCT1-1 Gene.

Products for TRR-TCT1-1 Gene

Sources for TRR-TCT1-1 Gene

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