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Aliases for TRR-TCT1-1 Gene

Subcategory (RNA class) for TRR-TCT1-1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for TRR-TCT1-1 Gene

  • Transfer RNA-Arg (TCT) 1-1 2 3
  • Transfer RNA Arginine 15 (Anticodon UCU) 2 3
  • AL049796.1 5
  • TRNAR15 3

External Ids for TRR-TCT1-1 Gene

Previous HGNC Symbols for TRR-TCT1-1 Gene

  • TRNAR15

Summaries for TRR-TCT1-1 Gene

GeneCards Summary for TRR-TCT1-1 Gene

TRR-TCT1-1 (Transfer RNA-Arg (TCT) 1-1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for TRR-TCT1-1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRR-TCT1-1 Gene

Genomics for TRR-TCT1-1 Gene

GeneHancer (GH) Regulatory Elements for TRR-TCT1-1 Gene

Promoters and enhancers for TRR-TCT1-1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I093844 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 556.3 -0.6 -599 4.5 ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 NFYC TRR-TCT1-1 BCAR3 GC01P093849 MIR760 PIR62105 GC01P093859 CCDC18-AS1 MTF2 MIG7 DR1
GH01I093078 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE 41 -766.7 -766739 4.5 MLX ZFP64 FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF416 MTF2 CCDC18-AS1 SNORA66 SNORD21 TRR-TCT1-1 GLMN RPAP2 RPL5 DR1 DNTTIP2
GH01I094232 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 13 +389.5 389489 7.4 PKNOX1 FOXA2 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 GLIS2 ZNF202 ARHGAP29 CCDC18-AS1 LOC107985092 TRR-TCT1-1 ABCA4 ABCD3 GC01M094182
GH01I094280 Enhancer 0.8 dbSUPER 25.3 +434.4 434447 3 ZFP64 RARA ZNF213 ZNF214 ZNF202 ZNF680 SP5 ZBTB11 ZC3H11A REST CCDC18-AS1 RWDD3 MIG7 ENSG00000228852 TRR-TCT1-1 DR1 CNN3 DNTTIP2 LOC729970 LOC107985092
GH01I092975 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 14.7 -870.8 -870765 5.3 HDGF PKNOX1 ZFP64 IRF4 TCF12 ZNF766 ZNF143 ATF7 RUNX3 JUNB RN7SL692P MTF2 CCDC18-AS1 SNORA66 TRR-TCT1-1 SNORD21 RPL5 EVI5 KIAA1107 MIG7
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TRR-TCT1-1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRR-TCT1-1 Gene

Genomic Locations for TRR-TCT1-1 Gene
chr1:93,847,174-93,848,939
(GRCh38/hg38)
Size:
1,766 bases
Orientation:
Plus strand
chr1:94,312,730-94,314,495
(GRCh37/hg19)

Genomic View for TRR-TCT1-1 Gene

Genes around TRR-TCT1-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRR-TCT1-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRR-TCT1-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRR-TCT1-1 Gene

Proteins for TRR-TCT1-1 Gene

Post-translational modifications for TRR-TCT1-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRR-TCT1-1 Gene

Domains & Families for TRR-TCT1-1 Gene

Gene Families for TRR-TCT1-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRR-TCT1-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRR-TCT1-1 Gene

Function for TRR-TCT1-1 Gene

Phenotypes From GWAS Catalog for TRR-TCT1-1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRR-TCT1-1 Gene

Localization for TRR-TCT1-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRR-TCT1-1 Gene

Pathways & Interactions for TRR-TCT1-1 Gene

SuperPathways for TRR-TCT1-1 Gene

No Data Available

Interacting Proteins for TRR-TCT1-1 Gene

Gene Ontology (GO) - Biological Process for TRR-TCT1-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRR-TCT1-1 Gene

Drugs & Compounds for TRR-TCT1-1 Gene

No Compound Related Data Available

Transcripts for TRR-TCT1-1 Gene

mRNA/cDNA for TRR-TCT1-1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRR-TCT1-1 Gene

No ASD Table

Relevant External Links for TRR-TCT1-1 Gene

GeneLoc Exon Structure for
TRR-TCT1-1
ECgene alternative splicing isoforms for
TRR-TCT1-1

Expression for TRR-TCT1-1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TRR-TCT1-1 Gene

genes like me logo Genes that share expression patterns with TRR-TCT1-1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRR-TCT1-1 Gene

Orthologs for TRR-TCT1-1 Gene

Evolution for TRR-TCT1-1 Gene

ENSEMBL:
Gene Tree for TRR-TCT1-1 (if available)
TreeFam:
Gene Tree for TRR-TCT1-1 (if available)

No data available for Orthologs for TRR-TCT1-1 Gene

Paralogs for TRR-TCT1-1 Gene

No data available for Paralogs for TRR-TCT1-1 Gene

Variants for TRR-TCT1-1 Gene

Additional Variant Information for TRR-TCT1-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRR-TCT1-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRR-TCT1-1 Gene

Disorders for TRR-TCT1-1 Gene

No disorders were found for TRR-TCT1-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRR-TCT1-1 Gene

Publications for TRR-TCT1-1 Gene

No publications were found for TRR-TCT1-1 Gene.

Products for TRR-TCT1-1 Gene

Sources for TRR-TCT1-1 Gene

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