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Aliases for TRR-TCG1-1 Gene

Subcategory (RNA class) for TRR-TCG1-1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for TRR-TCG1-1 Gene

  • Transfer RNA-Arg (TCG) 1-1 2 3
  • Transfer RNA Arginine 22 (Anticodon UCG) 2 3
  • TRNA-Arg-TCG-1-1 3
  • RP11-217B1.2 5
  • TRNAR22 3

External Ids for TRR-TCG1-1 Gene

Previous HGNC Symbols for TRR-TCG1-1 Gene

  • TRNAR22

Summaries for TRR-TCG1-1 Gene

GeneCards Summary for TRR-TCG1-1 Gene

TRR-TCG1-1 (Transfer RNA-Arg (TCG) 1-1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRR-TCG1-1 Gene

Genomics for TRR-TCG1-1 Gene

Regulatory Elements for TRR-TCG1-1 Gene

Enhancers for TRR-TCG1-1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15G089332 1.2 ENCODE 6.5 -0.3 -338 3.5 CREB3L1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC TBX21 MEF2D POLG LOC100631255 TRR-TCG1-1 MIR6766
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRR-TCG1-1 on UCSC Golden Path with GeneCards custom track

Promoters for TRR-TCG1-1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000080901 -253 2001 CREB3L1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC TBX21 MEF2D

Genomic Location for TRR-TCG1-1 Gene

Chromosome:
15
Start:
89,335,053 bp from pter
End:
89,336,161 bp from pter
Size:
1,109 bases
Orientation:
Plus strand

Genomic View for TRR-TCG1-1 Gene

Genes around TRR-TCG1-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRR-TCG1-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRR-TCG1-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRR-TCG1-1 Gene

Proteins for TRR-TCG1-1 Gene

Post-translational modifications for TRR-TCG1-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRR-TCG1-1 Gene

Domains & Families for TRR-TCG1-1 Gene

Gene Families for TRR-TCG1-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRR-TCG1-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRR-TCG1-1 Gene

Function for TRR-TCG1-1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRR-TCG1-1 Gene

Localization for TRR-TCG1-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRR-TCG1-1 Gene

Pathways & Interactions for TRR-TCG1-1 Gene

SuperPathways for TRR-TCG1-1 Gene

No Data Available

Interacting Proteins for TRR-TCG1-1 Gene

Gene Ontology (GO) - Biological Process for TRR-TCG1-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRR-TCG1-1 Gene

Drugs & Compounds for TRR-TCG1-1 Gene

No Compound Related Data Available

Transcripts for TRR-TCG1-1 Gene

mRNA/cDNA for TRR-TCG1-1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TRR-TCG1-1 Gene

No ASD Table

Relevant External Links for TRR-TCG1-1 Gene

GeneLoc Exon Structure for
TRR-TCG1-1
ECgene alternative splicing isoforms for
TRR-TCG1-1

Expression for TRR-TCG1-1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TRR-TCG1-1 Gene

genes like me logo Genes that share expression patterns with TRR-TCG1-1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRR-TCG1-1 Gene

Orthologs for TRR-TCG1-1 Gene

Evolution for TRR-TCG1-1 Gene

ENSEMBL:
Gene Tree for TRR-TCG1-1 (if available)
TreeFam:
Gene Tree for TRR-TCG1-1 (if available)

No data available for Orthologs for TRR-TCG1-1 Gene

Paralogs for TRR-TCG1-1 Gene

No data available for Paralogs for TRR-TCG1-1 Gene

Variants for TRR-TCG1-1 Gene

Relevant External Links for TRR-TCG1-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRR-TCG1-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRR-TCG1-1 Gene

Disorders for TRR-TCG1-1 Gene

No disorders were found for TRR-TCG1-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRR-TCG1-1 Gene

Publications for TRR-TCG1-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan P.P. … Lowe T.M. (Nucleic Acids Res. 2009) 3 64

Products for TRR-TCG1-1 Gene

Sources for TRR-TCG1-1 Gene

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