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Aliases for TRR-CCT8-1 Gene

Subcategory (RNA class) for TRR-CCT8-1 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for TRR-CCT8-1 Gene

  • Transfer RNA-Arg (CCT) 8-1 2 3
  • Transfer RNA Arginine 32 (Anticodon CCU) Pseudogene 2 3
  • TRNA-Arg-CCT-8-1 3
  • TRNAR32P 3

External Ids for TRR-CCT8-1 Gene

Previous HGNC Symbols for TRR-CCT8-1 Gene

  • TRNAR32P

Previous GeneCards Identifiers for TRR-CCT8-1 Gene

  • GC01M149771
  • GC01M149774
  • GC01M149777
  • GC01M149780
  • GC01M149783
  • GC01M149791

Summaries for TRR-CCT8-1 Gene

GeneCards Summary for TRR-CCT8-1 Gene

TRR-CCT8-1 (Transfer RNA-Arg (CCT) 8-1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for TRR-CCT8-1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRR-CCT8-1 Gene

Genomics for TRR-CCT8-1 Gene

Regulatory Elements for TRR-CCT8-1 Gene

Enhancers for TRR-CCT8-1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H149775 0.8 Ensembl 0.4 -19.1 -19132 1 HDAC1 LEF1 PKNOX1 NFRKB RELA EGR1 FOXK2 NCOR1 ATF7 RFX1 SV2A FCGR1A TRR-CCT8-1
GH01H149772 0.2 Ensembl 0.4 -15.6 -15610 0 FCGR1A TRR-CCT8-1
GH01H149771 0.2 Ensembl 0.4 -14.8 -14810 0 SV2A FCGR1A TRR-CCT8-1
GH01H149768 0.2 Ensembl 0.4 -12.6 -12610 1 FCGR1A TRR-CCT8-1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRR-CCT8-1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRR-CCT8-1 Gene

Chromosome:
1
Start:
149,756,721 bp from pter
End:
149,756,791 bp from pter
Size:
71 bases
Orientation:
Minus strand

Genomic View for TRR-CCT8-1 Gene

Genes around TRR-CCT8-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRR-CCT8-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRR-CCT8-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRR-CCT8-1 Gene

Proteins for TRR-CCT8-1 Gene

Post-translational modifications for TRR-CCT8-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRR-CCT8-1 Gene

Domains & Families for TRR-CCT8-1 Gene

Gene Families for TRR-CCT8-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRR-CCT8-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRR-CCT8-1 Gene

Function for TRR-CCT8-1 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TRR-CCT8-1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRR-CCT8-1 Gene

Localization for TRR-CCT8-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRR-CCT8-1 Gene

Pathways & Interactions for TRR-CCT8-1 Gene

SuperPathways for TRR-CCT8-1 Gene

No Data Available

Interacting Proteins for TRR-CCT8-1 Gene

Gene Ontology (GO) - Biological Process for TRR-CCT8-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRR-CCT8-1 Gene

Drugs & Compounds for TRR-CCT8-1 Gene

No Compound Related Data Available

Transcripts for TRR-CCT8-1 Gene

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TRR-CCT8-1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for TRR-CCT8-1 Gene

No ASD Table

Relevant External Links for TRR-CCT8-1 Gene

GeneLoc Exon Structure for
TRR-CCT8-1
ECgene alternative splicing isoforms for
TRR-CCT8-1

No data available for mRNA/cDNA for TRR-CCT8-1 Gene

Expression for TRR-CCT8-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRR-CCT8-1 Gene

Orthologs for TRR-CCT8-1 Gene

No data available for Orthologs and Evolution for TRR-CCT8-1 Gene

Paralogs for TRR-CCT8-1 Gene

No data available for Paralogs for TRR-CCT8-1 Gene

Variants for TRR-CCT8-1 Gene

Relevant External Links for TRR-CCT8-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRR-CCT8-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRR-CCT8-1 Gene

Disorders for TRR-CCT8-1 Gene

No disorders were found for TRR-CCT8-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRR-CCT8-1 Gene

Publications for TRR-CCT8-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 60

Products for TRR-CCT8-1 Gene

Sources for TRR-CCT8-1 Gene

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