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Aliases for TRR-CCT2-1 Gene

Subcategory (RNA class) for TRR-CCT2-1 Gene

tRNA

Quality Score for this RNA gene is

2

Aliases for TRR-CCT2-1 Gene

  • Transfer RNA-Arg (CCT) 2-1 2 3
  • Transfer RNA Arginine 20 (Anticodon CCU) 2 3
  • TRNA-Arg-CCT-2-1 3
  • TRNAR20 3

External Ids for TRR-CCT2-1 Gene

ORGUL Members for TRR-CCT2-1 Gene

Previous HGNC Symbols for TRR-CCT2-1 Gene

  • TRNAR20

Summaries for TRR-CCT2-1 Gene

GeneCards Summary for TRR-CCT2-1 Gene

TRR-CCT2-1 (Transfer RNA-Arg (CCT) 2-1) is an RNA Gene, and is affiliated with the tRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRR-CCT2-1 Gene

Genomics for TRR-CCT2-1 Gene

Regulatory Elements for TRR-CCT2-1 Gene

Enhancers for TRR-CCT2-1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17F075031 1.2 FANTOM5 ENCODE 0.8 -0.1 -118 5.8 MLX CREB3L1 ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF548 ZNF263 ENSG00000266980 NUP85 NT5C UNK ENSG00000264829 ATP5H LOC101928343 HID1 TSEN54 TRIM65
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around TRR-CCT2-1 on UCSC Golden Path with GeneCards custom track

Promoters for TRR-CCT2-1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001538177 403 3401 MLX CREB3L1 ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3

Genomic Location for TRR-CCT2-1 Gene

Chromosome:
17
Start:
75,034,431 bp from pter
End:
75,034,503 bp from pter
Size:
73 bases
Orientation:
Minus strand

Genomic View for TRR-CCT2-1 Gene

Genes around TRR-CCT2-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRR-CCT2-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRR-CCT2-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRR-CCT2-1 Gene

Proteins for TRR-CCT2-1 Gene

Post-translational modifications for TRR-CCT2-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRR-CCT2-1 Gene

Domains & Families for TRR-CCT2-1 Gene

Gene Families for TRR-CCT2-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRR-CCT2-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRR-CCT2-1 Gene

Function for TRR-CCT2-1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRR-CCT2-1 Gene

Localization for TRR-CCT2-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRR-CCT2-1 Gene

Pathways & Interactions for TRR-CCT2-1 Gene

SuperPathways for TRR-CCT2-1 Gene

No Data Available

Interacting Proteins for TRR-CCT2-1 Gene

Gene Ontology (GO) - Biological Process for TRR-CCT2-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRR-CCT2-1 Gene

Transcripts for TRR-CCT2-1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for TRR-CCT2-1 Gene

No ASD Table

Relevant External Links for TRR-CCT2-1 Gene

GeneLoc Exon Structure for
TRR-CCT2-1
ECgene alternative splicing isoforms for
TRR-CCT2-1

No data available for mRNA/cDNA for TRR-CCT2-1 Gene

Expression for TRR-CCT2-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TRR-CCT2-1 Gene

Orthologs for TRR-CCT2-1 Gene

No data available for Orthologs and Evolution for TRR-CCT2-1 Gene

Paralogs for TRR-CCT2-1 Gene

No data available for Paralogs for TRR-CCT2-1 Gene

Variants for TRR-CCT2-1 Gene

Relevant External Links for TRR-CCT2-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRR-CCT2-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRR-CCT2-1 Gene

Disorders for TRR-CCT2-1 Gene

No disorders were found for TRR-CCT2-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRR-CCT2-1 Gene

Publications for TRR-CCT2-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan P.P. … Lowe T.M. (Nucleic Acids Res. 2009) 3 64

Products for TRR-CCT2-1 Gene

Sources for TRR-CCT2-1 Gene

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