Free for academic non-profit institutions. Other users need a Commercial license

Aliases for TRR-CCG2-1 Gene

Subcategory (RNA class) for TRR-CCG2-1 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for TRR-CCG2-1 Gene

  • Transfer RNA-Arg (CCG) 2-1 2 3
  • Transfer RNA Arginine 4 (Anticodon CCG) 2 3
  • TRNA Arginine (CCG) 4 2 3
  • Transfer RNA Arginine (CCG) 4 3
  • TRNA-Arg-CCG-2-1 3
  • TRNAR4 3
  • TRR4 3

External Ids for TRR-CCG2-1 Gene

Previous HGNC Symbols for TRR-CCG2-1 Gene

  • TRR4
  • TRNAR4

Summaries for TRR-CCG2-1 Gene

GeneCards Summary for TRR-CCG2-1 Gene

TRR-CCG2-1 (Transfer RNA-Arg (CCG) 2-1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRR-CCG2-1 Gene

Genomics for TRR-CCG2-1 Gene

Regulatory Elements for TRR-CCG2-1 Gene

Enhancers for TRR-CCG2-1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17F068019 0.8 Ensembl ENCODE 0.8 -0.2 -214 2.0 CREB3L1 MLX FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF548 ZNF263 SP3 NOL11 HELZ LRRC37A16P SH3GL1P3 FBXO36P1 ENSG00000264421 RPL36AP48 TRR-CCG2-1 KPNA2
GH17F068015 0.6 Ensembl 0.8 +3.9 3869 0.6 BCOR CTCF PKNOX1 SAP130 ZMYM3 ZNF384 CEBPG RAD21 ZNF2 HBP1 LRRC37A16P NOL11 HELZ TRR-CCG2-1 PIR32457
GH17F068011 1.2 Ensembl ENCODE 0.4 +8.7 8669 0.6 HDGF CBX3 ARNT KLF17 GLI4 ZNF2 RAD21 RARA CHAMP1 ZNF143 LRRC37A16P SH3GL1P3 PIR32457 TRR-CCG2-1
GH17F068029 0.2 ENCODE 0.4 -9.8 -9830 0.5 PKNOX1 MLX ARID4B DMAP1 ZNF48 YY1 GATA2 ZNF143 SP5 NFYC KPNA2 TRR-CCG2-1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around TRR-CCG2-1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRR-CCG2-1 Gene

Chromosome:
17
Start:
68,019,897 bp from pter
End:
68,019,969 bp from pter
Size:
73 bases
Orientation:
Minus strand

Genomic View for TRR-CCG2-1 Gene

Genes around TRR-CCG2-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRR-CCG2-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRR-CCG2-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRR-CCG2-1 Gene

Proteins for TRR-CCG2-1 Gene

Post-translational modifications for TRR-CCG2-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRR-CCG2-1 Gene

Domains & Families for TRR-CCG2-1 Gene

Gene Families for TRR-CCG2-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRR-CCG2-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRR-CCG2-1 Gene

Function for TRR-CCG2-1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRR-CCG2-1 Gene

Localization for TRR-CCG2-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRR-CCG2-1 Gene

Pathways & Interactions for TRR-CCG2-1 Gene

SuperPathways for TRR-CCG2-1 Gene

No Data Available

Interacting Proteins for TRR-CCG2-1 Gene

Gene Ontology (GO) - Biological Process for TRR-CCG2-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRR-CCG2-1 Gene

Transcripts for TRR-CCG2-1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for TRR-CCG2-1 Gene

No ASD Table

Relevant External Links for TRR-CCG2-1 Gene

GeneLoc Exon Structure for
TRR-CCG2-1
ECgene alternative splicing isoforms for
TRR-CCG2-1

No data available for mRNA/cDNA for TRR-CCG2-1 Gene

Expression for TRR-CCG2-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TRR-CCG2-1 Gene

Orthologs for TRR-CCG2-1 Gene

No data available for Orthologs and Evolution for TRR-CCG2-1 Gene

Paralogs for TRR-CCG2-1 Gene

No data available for Paralogs for TRR-CCG2-1 Gene

Variants for TRR-CCG2-1 Gene

Relevant External Links for TRR-CCG2-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRR-CCG2-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRR-CCG2-1 Gene

Disorders for TRR-CCG2-1 Gene

No disorders were found for TRR-CCG2-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRR-CCG2-1 Gene

Publications for TRR-CCG2-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan P.P. … Lowe T.M. (Nucleic Acids Res. 2009) 3 64

Products for TRR-CCG2-1 Gene

Sources for TRR-CCG2-1 Gene

Content
Loading form....