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Aliases for TRR-CCG1-1 Gene

Subcategory (RNA class) for TRR-CCG1-1 Gene

tRNA

Quality Score for this RNA gene is

2

Aliases for TRR-CCG1-1 Gene

  • Transfer RNA-Arg (CCG) 1-1 2 3
  • Transfer RNA Arginine 24 (Anticodon CCG) 2 3
  • Transfer RNA-Arg (CCG) 1-2 2 3
  • TRNA-Arg-CCG-1-2 3
  • TRR-CCG1-2 3
  • TRNAR24 3

External Ids for TRR-CCG1-1 Gene

ORGUL Members for TRR-CCG1-1 Gene

Previous HGNC Symbols for TRR-CCG1-1 Gene

  • TRNAR24
  • TRR-CCG1-2

Previous GeneCards Identifiers for TRR-CCG1-1 Gene

  • GC16P003170
  • GC16P003212

Summaries for TRR-CCG1-1 Gene

GeneCards Summary for TRR-CCG1-1 Gene

TRR-CCG1-1 (Transfer RNA-Arg (CCG) 1-1) is an RNA Gene, and is affiliated with the tRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRR-CCG1-1 Gene

Genomics for TRR-CCG1-1 Gene

Regulatory Elements for TRR-CCG1-1 Gene

Enhancers for TRR-CCG1-1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06F028742 1.3 Ensembl ENCODE 0.8 -0.1 -148 1.3 PKNOX1 ARNT CREB3L1 SIN3A ZNF2 ZNF766 KLF13 SP3 SREBF1 MEF2D TRIM27 ZKSCAN8 ZKSCAN3 ZKSCAN4 GPX5 ZNF603P ZFP57 LINC01556 ZSCAN23 GC06P028748
GH06F028747 1.3 Ensembl ENCODE 0.8 -4.6 -4596 1.2 ARNT ZNF2 FOS ZNF263 SP3 REST SREBF1 SSRP1 MIER3 ZNF610 TRIM27 ZKSCAN3 ZFP57 ZKSCAN4 ZKSCAN8 ZNF603P ZNF311 GPX5 LINC01556 ZNF602P
GH06F028743 0.9 ENCODE 0.8 +0.9 936 0.1 HDGF TBP ATF1 CBX3 PKNOX1 CREB3L1 NFRKB YBX1 NFXL1 ZBTB40 TRIM27 ZKSCAN3 ZKSCAN4 ZKSCAN8 GPX5 TRR-CCG1-1 GC06M028736 TRV-AAC6-1
GH06F028737 1 Ensembl ENCODE 0.4 +5.2 5177 1.3 TBP E2F1 ZNF316 ZFHX2 ADNP ZSCAN29 MAFK L3MBTL2 CEBPB CBX2 TRIM27 ZFP57 ZNF602P LINC01556 TRV-AAC6-1 GC06M028736 TRR-CCG1-1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRR-CCG1-1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRR-CCG1-1 Gene

Chromosome:
6
Start:
28,742,952 bp from pter
End:
28,743,024 bp from pter
Size:
73 bases
Orientation:
Minus strand

Genomic View for TRR-CCG1-1 Gene

Genes around TRR-CCG1-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRR-CCG1-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRR-CCG1-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for TRR-CCG1-1 Gene

Post-translational modifications for TRR-CCG1-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRR-CCG1-1 Gene

Domains & Families for TRR-CCG1-1 Gene

Gene Families for TRR-CCG1-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRR-CCG1-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRR-CCG1-1 Gene

Function for TRR-CCG1-1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRR-CCG1-1 Gene

Localization for TRR-CCG1-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRR-CCG1-1 Gene

Pathways & Interactions for TRR-CCG1-1 Gene

SuperPathways for TRR-CCG1-1 Gene

No Data Available

Interacting Proteins for TRR-CCG1-1 Gene

Gene Ontology (GO) - Biological Process for TRR-CCG1-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRR-CCG1-1 Gene

Transcripts for TRR-CCG1-1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for TRR-CCG1-1 Gene

No ASD Table

Relevant External Links for TRR-CCG1-1 Gene

GeneLoc Exon Structure for
TRR-CCG1-1
ECgene alternative splicing isoforms for
TRR-CCG1-1

No data available for mRNA/cDNA for TRR-CCG1-1 Gene

Expression for TRR-CCG1-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TRR-CCG1-1 Gene

Orthologs for TRR-CCG1-1 Gene

No data available for Orthologs and Evolution for TRR-CCG1-1 Gene

Paralogs for TRR-CCG1-1 Gene

No data available for Paralogs for TRR-CCG1-1 Gene

Variants for TRR-CCG1-1 Gene

Relevant External Links for TRR-CCG1-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRR-CCG1-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRR-CCG1-1 Gene

Disorders for TRR-CCG1-1 Gene

No disorders were found for TRR-CCG1-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRR-CCG1-1 Gene

Publications for TRR-CCG1-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan P.P. … Lowe T.M. (Nucleic Acids Res. 2009) 3 64

Products for TRR-CCG1-1 Gene

Sources for TRR-CCG1-1 Gene

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