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Aliases for TRQ-TTG5-1 Gene

Subcategory (RNA class) for TRQ-TTG5-1 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for TRQ-TTG5-1 Gene

  • Transfer RNA-Gln (TTG) 5-1 2 3
  • Transfer RNA Glutamine 39 (Anticodon UUG) Pseudogene 2 3
  • TRNA-Gln-TTG-5-1 3
  • TRNAQ39P 3

External Ids for TRQ-TTG5-1 Gene

Previous HGNC Symbols for TRQ-TTG5-1 Gene

  • TRNAQ39P

Summaries for TRQ-TTG5-1 Gene

GeneCards Summary for TRQ-TTG5-1 Gene

TRQ-TTG5-1 (Transfer RNA-Gln (TTG) 5-1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for TRQ-TTG5-1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRQ-TTG5-1 Gene

Genomics for TRQ-TTG5-1 Gene

Regulatory Elements for TRQ-TTG5-1 Gene

Enhancers for TRQ-TTG5-1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02H045727 1.5 FANTOM5 Ensembl ENCODE 0.4 -19.3 -19306 3 PKNOX1 TBL1XR1 BMI1 BATF RAD21 ZNF143 ZNF207 ATF7 ETV6 RUNX3 GC02P045738 TRQ-TTG5-1
GH02H045698 0.9 Ensembl ENCODE 0.4 +11.1 11096 1 MAX JUNB EBF1 BATF JUND RCOR1 RUNX3 MAFK CREM LOC105374580 PRKCE TRQ-TTG5-1
GH02H045722 0.8 Ensembl ENCODE 0.4 -12.9 -12851 1 ZNF687 MAX MNT MLLT1 EBF1 SP7 PRKCE LOC105374580 TRQ-TTG5-1 GC02P045738
GH02H045690 0.8 ENCODE 0.4 +19.3 19287 1 PKNOX1 EBF1 BATF POLR2A EED SCRT2 ETV6 RUNX3 IKZF2 CREM PRKCE LOC105374580 TRQ-TTG5-1
GH02H045681 1 Ensembl ENCODE 0.3 +28.0 28030 1 JUN BACH1 CEBPB EP300 FOSL1 MAFF JUND ZNF316 POLR2A ZKSCAN8 PRKCE LOC105374580 TRQ-TTG5-1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRQ-TTG5-1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRQ-TTG5-1 Gene

Chromosome:
2
Start:
45,710,302 bp from pter
End:
45,710,374 bp from pter
Size:
73 bases
Orientation:
Minus strand

Genomic View for TRQ-TTG5-1 Gene

Genes around TRQ-TTG5-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRQ-TTG5-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRQ-TTG5-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRQ-TTG5-1 Gene

Proteins for TRQ-TTG5-1 Gene

Post-translational modifications for TRQ-TTG5-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRQ-TTG5-1 Gene

Domains & Families for TRQ-TTG5-1 Gene

Gene Families for TRQ-TTG5-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRQ-TTG5-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRQ-TTG5-1 Gene

Function for TRQ-TTG5-1 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TRQ-TTG5-1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRQ-TTG5-1 Gene

Localization for TRQ-TTG5-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRQ-TTG5-1 Gene

Pathways & Interactions for TRQ-TTG5-1 Gene

SuperPathways for TRQ-TTG5-1 Gene

No Data Available

Interacting Proteins for TRQ-TTG5-1 Gene

Gene Ontology (GO) - Biological Process for TRQ-TTG5-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRQ-TTG5-1 Gene

Drugs & Compounds for TRQ-TTG5-1 Gene

No Compound Related Data Available

Transcripts for TRQ-TTG5-1 Gene

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TRQ-TTG5-1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for TRQ-TTG5-1 Gene

No ASD Table

Relevant External Links for TRQ-TTG5-1 Gene

GeneLoc Exon Structure for
TRQ-TTG5-1
ECgene alternative splicing isoforms for
TRQ-TTG5-1

No data available for mRNA/cDNA for TRQ-TTG5-1 Gene

Expression for TRQ-TTG5-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRQ-TTG5-1 Gene

Orthologs for TRQ-TTG5-1 Gene

No data available for Orthologs and Evolution for TRQ-TTG5-1 Gene

Paralogs for TRQ-TTG5-1 Gene

No data available for Paralogs for TRQ-TTG5-1 Gene

Variants for TRQ-TTG5-1 Gene

Relevant External Links for TRQ-TTG5-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRQ-TTG5-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRQ-TTG5-1 Gene

Disorders for TRQ-TTG5-1 Gene

No disorders were found for TRQ-TTG5-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRQ-TTG5-1 Gene

Publications for TRQ-TTG5-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 60

Products for TRQ-TTG5-1 Gene

Sources for TRQ-TTG5-1 Gene

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