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Aliases for TRQ-TTG2-1 Gene

Subcategory (RNA class) for TRQ-TTG2-1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for TRQ-TTG2-1 Gene

  • Transfer RNA-Gln (TTG) 2-1 2 3
  • Transfer RNA Glutamine 12 (Anticodon UUG) 2 3
  • TRNA-Gln-TTG-2-1 3
  • RP5-1186N24.3 5
  • TRNAQ12 3

External Ids for TRQ-TTG2-1 Gene

Previous HGNC Symbols for TRQ-TTG2-1 Gene

  • TRNAQ12

Summaries for TRQ-TTG2-1 Gene

GeneCards Summary for TRQ-TTG2-1 Gene

TRQ-TTG2-1 (Transfer RNA-Gln (TTG) 2-1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRQ-TTG2-1 Gene

Genomics for TRQ-TTG2-1 Gene

Regulatory Elements for TRQ-TTG2-1 Gene

Enhancers for TRQ-TTG2-1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06G028586 1.1 ENCODE 0.7 -0.2 -213 1.9 HDGF FOXA2 PKNOX1 CREB3L1 ARNT SIN3A ARID4B FEZF1 DMAP1 ZNF2 ZNF603P ZKSCAN3 GPX6 GPX5 ZNF311 TRQ-TTG2-1 PIR44110
GH06G028585 0.9 Ensembl 0.7 -1.8 -1845 0.3 HDGF PKNOX1 ARNT NFXL1 YBX1 RAD21 ZNF366 SMARCA5 ZNF654 ZBTB2 TRQ-TTG2-1 PIR44110
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRQ-TTG2-1 on UCSC Golden Path with GeneCards custom track

Promoters for TRQ-TTG2-1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000195239 22 1201 HDGF FOXA2 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 SLC30A9 ZNF143

Genomic Location for TRQ-TTG2-1 Gene

Chromosome:
6
Start:
28,587,378 bp from pter
End:
28,591,747 bp from pter
Size:
4,370 bases
Orientation:
Plus strand

Genomic View for TRQ-TTG2-1 Gene

Genes around TRQ-TTG2-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRQ-TTG2-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRQ-TTG2-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRQ-TTG2-1 Gene

Proteins for TRQ-TTG2-1 Gene

Post-translational modifications for TRQ-TTG2-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRQ-TTG2-1 Gene

Domains & Families for TRQ-TTG2-1 Gene

Gene Families for TRQ-TTG2-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRQ-TTG2-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRQ-TTG2-1 Gene

Function for TRQ-TTG2-1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRQ-TTG2-1 Gene

Localization for TRQ-TTG2-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRQ-TTG2-1 Gene

Pathways & Interactions for TRQ-TTG2-1 Gene

SuperPathways for TRQ-TTG2-1 Gene

No Data Available

Interacting Proteins for TRQ-TTG2-1 Gene

Gene Ontology (GO) - Biological Process for TRQ-TTG2-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRQ-TTG2-1 Gene

Drugs & Compounds for TRQ-TTG2-1 Gene

No Compound Related Data Available

Transcripts for TRQ-TTG2-1 Gene

mRNA/cDNA for TRQ-TTG2-1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRQ-TTG2-1 Gene

No ASD Table

Relevant External Links for TRQ-TTG2-1 Gene

GeneLoc Exon Structure for
TRQ-TTG2-1
ECgene alternative splicing isoforms for
TRQ-TTG2-1

Expression for TRQ-TTG2-1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TRQ-TTG2-1 Gene

genes like me logo Genes that share expression patterns with TRQ-TTG2-1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRQ-TTG2-1 Gene

Orthologs for TRQ-TTG2-1 Gene

Evolution for TRQ-TTG2-1 Gene

ENSEMBL:
Gene Tree for TRQ-TTG2-1 (if available)
TreeFam:
Gene Tree for TRQ-TTG2-1 (if available)

No data available for Orthologs for TRQ-TTG2-1 Gene

Paralogs for TRQ-TTG2-1 Gene

No data available for Paralogs for TRQ-TTG2-1 Gene

Variants for TRQ-TTG2-1 Gene

Relevant External Links for TRQ-TTG2-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRQ-TTG2-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRQ-TTG2-1 Gene

Disorders for TRQ-TTG2-1 Gene

No disorders were found for TRQ-TTG2-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRQ-TTG2-1 Gene

Publications for TRQ-TTG2-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan P.P. … Lowe T.M. (Nucleic Acids Res. 2009) 3 64

Products for TRQ-TTG2-1 Gene

Sources for TRQ-TTG2-1 Gene

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