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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

TRPC3 Gene

protein-coding   GIFtS: 64
GCID: GC04M122800

transient receptor potential cation channel, subfamily C,...

 Explore 22 diseases affiliated with
TRPC3 via our new
 Human Malady Compendium 
Biological research products
for TRPC3
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Transient Receptor Potential Cation Channel, Subfamily C, Member 31 2     Short Transient Receptor Potential Channel 32
Transient Receptor Protein 32 3     TRP-33
TRP32 3     TrpC33
HTrp-31     HTrp31

External Ids:    HGNC: 123351   Entrez Gene: 72222   Ensembl: ENSG000001387417   OMIM: 6023455   UniProtKB: Q135073   

Export aliases for TRPC3 gene to outside databases

Previous GC identifers: GC04M123725 GC04M123079 GC04M123193 GC04M123259 GC04M123158 GC04M118526


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for TRPC3:
The protein encoded by this gene is a membrane protein that can form a non-selective channel permeable to calcium and
other cations. The encoded protein appears to be induced to form channels by a receptor tyrosine kinase-activated
phosphatidylinositol second messenger system and also by depletion of intracellular calcium stores. Two transcript
variants encoding different isoforms have been found for this gene. (provided by RefSeq, Oct 2011)

UniProtKB/Swiss-Prot: TRPC3_HUMAN, Q13507
Function: Thought to form a receptor-activated non-selective calcium permeant cation channel. Probably is operated by a
phosphatidylinositol second messenger system activated by receptor tyrosine kinases or G-protein coupled receptors.
Activated by diacylglycerol (DAG) in a membrane-delimited fashion, independently of protein kinase C, and by inositol
1,4,5-triphosphate receptors (ITPR) with bound IP3. May also be activated by internal calcium store depletion

Gene Wiki entry for TRPC3


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000004.11  NC_018915.1  NT_016354.19  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the TRPC3 gene promoter:
         CREB   AML1a   deltaCREB   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidTRPC3 promoter sequence
   Search SABiosciences Chromatin IP Primers for TRPC3

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat TRPC3


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 4q27   Ensembl cytogenetic band:  4q27   HGNC cytogenetic band: 4q27

TRPC3 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
TRPC3 gene location

GeneLoc information about chromosome 4         GeneLoc Exon Structure

GeneLoc location for GC04M122800:  view genomic region     (about GC identifiers)

Start:
122,800,182 bp from pter      End:
122,872,909 bp from pter
Size:
72,728 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: TRPC3_HUMAN, Q13507 (See protein sequence)
Recommended Name: Short transient receptor potential channel 3  
Size: 836 amino acids; 96009 Da
Subunit: Interacts with TRPC1, ITPR1, ITPR3, MX1 and RNF24. Interacts with JPH2; the interaction is involved in
maintaining Ca(2+) homeostasis in skeletal muscle and is mediated by JPH2 'Ser-165' phosphorylation
Subcellular location: Membrane; Multi-pass membrane protein
Secondary accessions: A7VJS1 E9PCJ9 O00593 Q15660 Q52M35 Q5G1L5
Alternative splicing: 3 isoforms:  Q13507-1   Q13507-2   Q13507-3   

Explore the universe of human proteins at neXtProt for TRPC3: NX_Q13507

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q13507

  • TRPC3 Protein expression data from MOPED and PaxDb:    About this image 
    TRPC3 Protein Expression
    REFSEQ proteins (2 alternative transcripts): 
    NP_001124170.1  NP_003296.1  

    ENSEMBL proteins: 
     ENSP00000264811   ENSP00000368966   ENSP00000423866   ENSP00000426899   ENSP00000422214  
    Reactome Protein details: Q13507
    Human Recombinant Protein Products for TRPC3: 
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    Novus Biologicals TRPC3 Proteins
    Novus Biologicals TRPC3 Lysate
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for TRPC3

    Gene Ontology (GO): 2 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005886plasma membrane TAS--
    GO:0005887integral to plasma membrane IDA9368034

    TRPC3 for ontologies           About GeneDecksing



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    Uscn ELISAs and CLIAs for TRPC3


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    TRPC3 for domains           About GeneDecksing

    5/7 InterPro domains/families (see all 7):
     IPR002153 TRPC_channel
     IPR020683 Ankyrin_rpt-contain_dom
     IPR005821 Ion_trans_dom
     IPR004729 TRP_channel
     IPR002110 Ankyrin_rpt

    Graphical View of Domain Structure for InterPro Entry Q13507

    ProtoNet protein and cluster: Q13507

    4 Blocks protein families:
    IPB002110 Ankyrin repeat signature
    IPB002153 Transient receptor potential family signature
    IPB005459 Transient receptor potential channel 3 signature
    IPB013555 Transient receptor ion channel II


    UniProtKB/Swiss-Prot: TRPC3_HUMAN, Q13507
    Similarity: Belongs to the transient receptor (TC 1.A.4) family. STrpC subfamily. TRPC3 sub-subfamily
    Similarity: Contains 4 ANK repeats


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, Sirion Biotech, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, Sirion Biotech, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Molecular Function:

         UniProtKB/Swiss-Prot Summary: TRPC3_HUMAN, Q13507
    Function: Thought to form a receptor-activated non-selective calcium permeant cation channel. Probably is operated by a
    phosphatidylinositol second messenger system activated by receptor tyrosine kinases or G-protein coupled receptors.
    Activated by diacylglycerol (DAG) in a membrane-delimited fashion, independently of protein kinase C, and by inositol
    1,4,5-triphosphate receptors (ITPR) with bound IP3. May also be activated by internal calcium store depletion

         Gene Ontology (GO): 5 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005227calcium activated cation channel activity ----
    GO:0005262calcium channel activity TAS9930701
    GO:0005515protein binding IPI15757897
    GO:0015279store-operated calcium channel activity TAS9215637
    GO:0070679inositol 1,4,5 trisphosphate binding IDA14505576
         
    TRPC3 for ontologies           About GeneDecksing


    Phenotypes:
         1 GenomeRNAi human phenotype for TRPC3:
     Decreased DCP1a protein expres 

         13 MGI mutant phenotypes (inferred from 4 alleles(MGI details for Trpc3):
     adipose tissue  behavior/neurological  cardiovascular system  growth/size  hematopoietic system 
     homeostasis/metabolism  immune system  limbs/digits/tail  mortality/aging  nervous system 
     other  skeleton  vision/eye 

    TRPC3 for phenotypes           About GeneDecksing

    Animal Models:
         Mouse knock-outs for TRPC3: Trpc3tm1.1Bmil Trpc3tm1.1Akon
       inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for TRPC3 

    miRNA
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    8/36 QIAGEN miScript miRNA Assays for microRNAs that regulate TRPC3 (see all 36):
    hsa-miR-301a hsa-miR-650 hsa-miR-218 hsa-miR-548m hsa-miR-23a hsa-miR-3612 hsa-miR-130b hsa-miR-2113
    SwitchGear 3'UTR luciferase reporter plasmidTRPC3 3' UTR sequence
    Inhib. RNA
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    In Situ Assay
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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for TRPC3


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/15 super-pathways (see all 15About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Signaling by GPCR
    Signaling by GPCR1.00
    Signal Transduction0.56
    GPCR downstream signaling0.89
    2Transcription_Role of VDR in regulation of genes involved in osteoporosis
    Transcription_Role of VDR in regulation of genes involved in osteoporosis1.00
    Transcription Role of VDR in regulation of genes involved in osteoporosis0.80
    3Platelet activation, signaling and aggregation
    Platelet activation, signaling and aggregation1.00
    Hemostasis0.43
    4Role of second messengers in netrin-1 signaling
    Role of second messengers in netrin-1 signaling1.00
    Activation of TRPC channels by Netrin-10.60
    5G alpha (q) signalling events
    G alpha (q) signalling events1.00
    Gastrin-CREB signalling pathway via PKC and MAPK0.90

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    4 EMD Millipore Pathways for TRPC3
        Transcription Role of VDR in regulation of genes involved in osteoporosis
    Transcription CREB pathway
    Sodium channels and transporters- inward current
    Calcium channels

    1 Downloadable PowerPoint Slide of QIAGEN Pathway Central Maps for TRPC3
        Intracellular Calcium Signaling

    1 GeneGo (Thomson Reuters) Pathway for TRPC3
        Transcription Role of VDR in regulation of genes involved in osteoporosis

    1 BioSystems Pathway for TRPC3 
        Trk receptor signaling mediated by PI3K and PLC-gamma

    5/16        Reactome Pathways for TRPC3 (see all 16)
        Developmental Biology
    Platelet homeostasis
    Elevation of cytosolic Ca2+ levels
    Signal Transduction
    G alpha (q) signalling events



    TRPC3 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for TRPC3

    STRING Interaction Network Preview (showing 5 interactants - click image to see 23)

    5/28 Interacting proteins for TRPC3 (Q135071, 3 ENSP000003689664) via UniProtKB, MINT, STRING, and/or I2D (see all 28)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    ITPR3Q145731, 3, ENSP000003634354EBI-520807,EBI-351055 I2D: score=4 STRING: ENSP00000363435
    CALM1P621583, ENSP000003494674I2D: score=1 STRING: ENSP00000349467
    CALM2P621583I2D: score=1 
    CALM3P621583I2D: score=1 
    MX1P205911, 3, ENSP000003815994EBI-520807,EBI-929476 I2D: score=3 STRING: ENSP00000381599
    About this table

    Gene Ontology (GO): 5/9 biological process terms (GO ID links to tree view) (see all 9):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006816calcium ion transport TAS9215637
    GO:0007411axon guidance TAS--
    GO:0007596blood coagulation TAS--
    GO:0007602phototransduction TAS9215637
    GO:0010524positive regulation of calcium ion transport into cytosol IDA--

    TRPC3 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    TRPC3 for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for TRPC3

    10/844 HMDB Compounds for TRPC3 (see all 844)    About this table
    CompoundSynonyms CAS #PubMed Ids
    CalciumCa (see all 2)7440-70-2--
    DG(14:0/14:0/0:0)DAG(14:0/14:0) (see all 9)----
    DG(14:0/14:1(9Z)/0:0)DAG(14:0/14:1) (see all 15)----
    DG(14:0/15:0/0:0)Diacylglycerol(29:0) (see all 9)----
    DG(14:0/16:0/0:0)DAG(30:0) (see all 9)----
    DG(14:0/16:1(9Z)/0:0)DG(30:1) (see all 15)----
    DG(14:0/18:0/0:0)DG(14:0/18:0) (see all 9)----
    DG(14:0/18:1(11Z)/0:0)Diacylglycerol (see all 15)----
    DG(14:0/18:1(9Z)/0:0)1-myristoyl-2-oleoyl-sn-glycerol (see all 15)----
    DG(14:0/18:2(9Z,12Z)/0:0)DAG(14:0/18:2n6) (see all 15)----
    10/19 Novoseek chemical compound relationships for TRPC3 gene (see all 19)    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    2-aminoethoxydiphenylborane 87.7 2 20068131 (1), 17351372 (1)
    1-oleoyl-2-acetyl-sn-glycerol 83.5 12 17351372 (3), 10882720 (2), 15533987 (2), 16522635 (2) (see all 5)
    skf 96365 83.3 1 15972814 (1)
    inositol 1,4,5 trisphosphate 77.3 15 12606542 (4), 11553786 (2), 12730194 (2), 11248050 (2) (see all 8)
    thapsigargin 74.1 9 11042129 (1), 9417057 (1), 11600493 (1), 12736151 (1) (see all 8)
    calcium 65.5 68 9298988 (7), 18431718 (5), 17569672 (3), 12736256 (3) (see all 28)
    2-amino-4-phosphonobutyric acid 64.8 1 15933213 (1)
    kt 5823 52.5 2 14983059 (1), 16331690 (1)
    calmidazolium 48.2 4 11248050 (1)
    carbachol 44.5 12 18755685 (3), 11830588 (2), 19332491 (1), 14736881 (1) (see all 5)

    Search CenterWatch for drugs/clinical trials and news about TRPC3 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
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    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for TRPC3 gene (2 alternative transcripts): 
    NM_001130698.1  NM_003305.2  

    Unigene Cluster for TRPC3:

    Transient receptor potential cation channel, subfamily C, member 3
    Hs.150981  [show with all ESTs]
    Unigene Representative Sequence: AY865574
    5 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000264811(uc003ief.2 uc011cgl.1) ENST00000379645(uc010inr.2 uc003ieg.2)
    ENST00000506449 ENST00000513531 ENST00000502968

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    hsa-miR-301a hsa-miR-650 hsa-miR-218 hsa-miR-548m hsa-miR-23a hsa-miR-3612 hsa-miR-130b hsa-miR-2113
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    GenScript: all cDNA clones in your preferred vector (see all 2): TRPC3 (NM_003305)
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      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat TRPC3
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat TRPC3

    Additional cDNA sequence: 

    AB255423.1 AB255424.1 AY865574.1 BC093682.1 BC093684.1 BC143239.1 X89068.1 Y13758.1 

    3 DOTS entries:

    DT.409154  DT.100744119  DT.121225219 

    17 AceView cDNA sequences:

    AW207876 AW296897 AW014163 BX281448 NM_003305 AI655379 R34716 X89068 
    BF438538 Y13758 BF516575 U47050 AI088264 BF512869 AA248593 D61017 
    R49588 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    TRPC3 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: AAAATGCATT
    TRPC3 Expression
    About this image
    See TRPC3 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for TRPC3

    SOURCE GeneReport for Unigene cluster: Hs.150981

    UniProtKB/Swiss-Prot: TRPC3_HUMAN, Q13507
    Tissue specificity: Expressed predominantly in brain and at much lower levels in ovary, colon, small intestine, lung,
    prostate, placenta and testis

        SABiosciences Expression via Pathway-Focused PCR Array including TRPC3: 
              Neuronal Ion Channels in human mouse rat

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    In Situ
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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for TRPC3

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for TRPC3 gene from 4/16 species (see all 16)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves TRPC31 transient receptor potential cation channel, subfamily more 82.14(n)
    93.68(a)
      374153  XM_003641203.1  XP_003641251.1 
    lizard
    (Anolis carolinensis)
    Reptilia TRPC36
    --
    93(a)
    1 ↔ 1
    5(138950276-139006843)
    rainbow trout
    (Oncorhynchus mykiss)
    Actinopterygii Omy.57852 Oncorhynchus mykiss transcribed sequence with moderate more 83.23(n)    BX317063.1 
    honey bee
    (Apis mellifera)
    Insecta --
    --
    28(a)
    1 → many
    GroupUn.1268(2616-22451)


    ENSEMBL Gene Tree for TRPC3 (if available)
    TreeFam Gene Tree for TRPC3 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for TRPC3 gene
    TRPC42  TRPC12  TRPC62  TRPC72  TRPC52  
    6 SIMAP similar genes for TRPC3 using alignment to 6 protein entries:     TRPC3_HUMAN (see all proteins):
    TRPC7    TRP7    TRPC6    TRPC4    TRPC5    TRPC1

    TRPC3 for paralogs           About GeneDecksing


    1 Pseudogenes.org Pseudogene for TRPC3
    PGOHUM00000250393


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/1351 NCBI SNPs in TRPC3 are shown (see all 1351    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 4 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs345820381,2
    C,F--118526693(+) ATGAGC/TAGACC 2 -- ds50013Minor allele frequency- T:0.33NA 6
    rs1161889901,2
    C--118527019(+) TCTAGA/GATTAT 2 -- ut310--------
    rs1912707691,2
    C--118527049(+) AAGAAA/TGTCTT 2 -- ut310--------
    rs1116906941,2
    C--118527095(+) TCTATA/TAAAAA 2 -- ut310--------
    rs799973251,2
    C--118527096(+) CTATTT/AAAAAA 2 -- ut311Minor allele frequency- A:0.50NA 2
    rs27068021,2
    C,H--118527122(+) CTTCAG/AAACTT 2 -- ut31 ese36Minor allele frequency- A:0.00NS EA NA 424
    rs769865791,2
    C,F--118527346(+) AAATGA/GATAAA 2 -- ut311Minor allele frequency- G:0.03WA 118
    rs1459483701,2
    C,F--118527631(+) TCAGTT/GTCTCA 4 /K /T mis12Minor allele frequency- G:0.00NA EU 5867
    rs1422027111,2
    C,F--118527680(+) TTGGCT/CCTTGT 4 /S /G mis11Minor allele frequency- C:0.00NA 4538
    rs412780871,2
    C,F--118527696(+) AAAAGT/CTCATA 4 /E syn15Minor allele frequency- C:0.02NA NS EU 6056

    HapMap Linkage Disequilibrium report for TRPC3 (122800182 - 122872909 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 1 variation for TRPC3
         1 Indel: 68791
    Human Gene Mutation Database (HGMD): TRPC3

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing TRPC3
    DNA2.0 Custom Variant and Variant Library Synthesis for TRPC3

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    TRPC3 for disorders           About GeneDecksing

    OMIM gene information: 602345    OMIM disorders: --

    20/22 diseases for TRPC3 (see all 22):    About MalaCards
    lambert-eaton myasthenic syndrome    type 2 diabetes mellitus    myasthenia gravis    essential hypertension
    diabetes mellitus    myasthenic syndrome    myasthenia    malignant hypertension
    bipolar disorder    hypertension    kidney disease    osteoporosis
    ovarian cancer    astrocytoma    prostate cancer    breast cancer
    cerebritis    cholesterol    hypoxia    prostatitis

    1 disease from the University of Copenhagen DISEASES database for TRPC3:
    Scheuermann's disease

    2 Novoseek disease relationships for TRPC3 gene    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    airways disease 21.3 1 16574942 (1)
    essential hypertension 14.7 5 17351372 (3), 18177730 (2)

    Human Genome Epidemiology (HuGE) Navigator: TRPC3 (1 document)

    Export disorders for TRPC3 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for TRPC3 gene, integrated from 9 sources (see all 169):
    (articles sorted by number of sources associating them with TRPC3)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. trp, a novel mammalian gene family essential for agonist-activated capacitative Ca2+ entry. (PubMed id 8646775)1, 2, 3 Zhu X....Birnbaumer L. (1996)
    2. Receptor-activated Ca2+ influx via human Trp3 stably expressed in human embryonic kidney (HEK)293 cells. Evidence for a non-capacitative Ca2+ entry. (PubMed id 9417057)1, 2, 9 Zhu X.... Birnbaumer L. (1998)
    3. Molecular cloning of TRPC3a, an N-terminally extended, store-operated variant of the human C3 transient receptor potential channel. (PubMed id 15728370)1, 2 Yildirim E.... Birnbaumer L. (2005)
    4. MxA, a member of the dynamin superfamily, interacts with the ankyrin-like repeat domain of TRPC. (PubMed id 15757897)1, 2 Lussier M.P....Boulay G. (2005)
    5. International Union of Pharmacology. XLIX. Nomenclature and structure-function relationships of transient receptor potential channels. (PubMed id 16382100)1, 3 Clapham D.E....Schultz G. (2005)
    6. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    7. Modulation of Ca(2+) entry by polypeptides of the inositol 1,4, 5- trisphosphate receptor (IP3R) that bind transient receptor potential (TRP): evidence for roles of TRP and IP3R in store depletion-activated Ca(2+) entry. (PubMed id 10611319)1, 2 Boulay G.... Birnbaumer L. (1999)
    8. Direct activation of human TRPC6 and TRPC3 channels by diacylglycerol. (PubMed id 9930701)1, 2 Hofmann T....Schultz G. (1999)
    9. The membrane topology of human transient receptor potential 3 as inferred from glycosylation-scanning mutagenesis and epitope immunocytochemistry. (PubMed id 9535843)1, 2 Vannier B.... Birnbaumer L. (1998)
    10. Functional interaction between InsP3 receptors and store-operated Htrp3 channels. (PubMed id 9853757)1, 2 Kiselyov K.... Muallem S. (1998)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 7222 HGNC: 12335 AceView: TRPC3 Ensembl:ENSG00000138741 euGenes: HUgn7222
    ECgene: TRPC3 H-InvDB: TRPC3

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for TRPC3 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for TRPC3 gene:
    Search GeneIP for patents involving TRPC3

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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