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Aliases for TRP-TGG3-3 Gene

Subcategory (RNA class) for TRP-TGG3-3 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for TRP-TGG3-3 Gene

  • Transfer RNA-Pro (TGG) 3-3 2 3
  • Transfer RNA Proline 19 (Anticodon UGG) 2 3
  • Transfer RNA-Pro (TGG) 3-2 2 3
  • TRNA-Pro-TGG-3-2 3
  • TRP-TGG3-2 3
  • TRNAP19 3

External Ids for TRP-TGG3-3 Gene

Previous HGNC Symbols for TRP-TGG3-3 Gene

  • TRNAP19
  • TRP-TGG3-2

Previous GeneCards Identifiers for TRP-TGG3-3 Gene

  • GC16M003184
  • GC16P003281
  • GC16P003320
  • GC16P003371

Summaries for TRP-TGG3-3 Gene

GeneCards Summary for TRP-TGG3-3 Gene

TRP-TGG3-3 (Transfer RNA-Pro (TGG) 3-3) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRP-TGG3-3 Gene

Genomics for TRP-TGG3-3 Gene

Regulatory Elements for TRP-TGG3-3 Gene

Enhancers for TRP-TGG3-3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16G003156 1.7 FANTOM5 ENCODE dbSUPER 0.7 -0.1 -129 3.8 CREB3L1 DMAP1 YY1 ZNF263 SP3 NFYC TBX21 MEF2D SSRP1 ZNF610 ZNF213-AS1 ZNF205 CLUAP1 RNPS1 MTCO1P28 ZNF174 ZNF263 MTND1P8 TIGD7 MTRNR2L4
GH16G003161 1 ENCODE dbSUPER 0.7 +2.8 2829 1.5 KLF1 ZNF362 RNF2 CHD4 KLF17 SIN3A ZNF384 ZNF121 HIC1 ZNF316 GC16M003165 PIR49024 TRP-TGG3-3
GH16G003162 0.8 ENCODE dbSUPER 0.7 +4.0 4014 0.1 HDGF ZNF512 MLLT1 FOXP1 ZNF213-AS1 GC16M003165 PIR49024 TRP-TGG3-3
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRP-TGG3-3 on UCSC Golden Path with GeneCards custom track

Promoters for TRP-TGG3-3 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000279473 -222 1801 HDGF CREB3L1 ARNT SIN3A ARID4B DMAP1 ZNF2 ZBTB7B YY1 ZNF766
ENSR00000082613 -1522 401 ARNT SIN3A ARID4B DMAP1 ZBTB7B FOS KLF13 ZNF263 NFYC ZHX2

Genomic Location for TRP-TGG3-3 Gene

Chromosome:
16
Start:
3,158,922 bp from pter
End:
3,158,993 bp from pter
Size:
72 bases
Orientation:
Plus strand

Genomic View for TRP-TGG3-3 Gene

Genes around TRP-TGG3-3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRP-TGG3-3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRP-TGG3-3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRP-TGG3-3 Gene

Proteins for TRP-TGG3-3 Gene

Post-translational modifications for TRP-TGG3-3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRP-TGG3-3 Gene

Domains & Families for TRP-TGG3-3 Gene

Gene Families for TRP-TGG3-3 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRP-TGG3-3: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRP-TGG3-3 Gene

Function for TRP-TGG3-3 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRP-TGG3-3 Gene

Localization for TRP-TGG3-3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRP-TGG3-3 Gene

Pathways & Interactions for TRP-TGG3-3 Gene

SuperPathways for TRP-TGG3-3 Gene

No Data Available

Interacting Proteins for TRP-TGG3-3 Gene

Gene Ontology (GO) - Biological Process for TRP-TGG3-3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRP-TGG3-3 Gene

Drugs & Compounds for TRP-TGG3-3 Gene

No Compound Related Data Available

Transcripts for TRP-TGG3-3 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRP-TGG3-3 Gene

No ASD Table

Relevant External Links for TRP-TGG3-3 Gene

GeneLoc Exon Structure for
TRP-TGG3-3
ECgene alternative splicing isoforms for
TRP-TGG3-3

No data available for mRNA/cDNA for TRP-TGG3-3 Gene

Expression for TRP-TGG3-3 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRP-TGG3-3 Gene

Orthologs for TRP-TGG3-3 Gene

No data available for Orthologs and Evolution for TRP-TGG3-3 Gene

Paralogs for TRP-TGG3-3 Gene

No data available for Paralogs for TRP-TGG3-3 Gene

Variants for TRP-TGG3-3 Gene

Relevant External Links for TRP-TGG3-3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRP-TGG3-3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRP-TGG3-3 Gene

Disorders for TRP-TGG3-3 Gene

No disorders were found for TRP-TGG3-3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRP-TGG3-3 Gene

Publications for TRP-TGG3-3 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan P.P. … Lowe T.M. (Nucleic Acids Res. 2009) 3 64

Products for TRP-TGG3-3 Gene

Sources for TRP-TGG3-3 Gene

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