Free for academic non-profit institutions. Other users need a Commercial license

Aliases for TRP-AGG2-7 Gene

Subcategory (RNA class) for TRP-AGG2-7 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for TRP-AGG2-7 Gene

  • Transfer RNA-Pro (AGG) 2-7 2 3
  • Transfer RNA Proline 9 (Anticodon AGG) 2 3
  • Transfer RNA-Pro (AGG) 2-5 2 3
  • TRNA-Pro-AGG-2-5 3
  • TRP-AGG2-5 3
  • TRNAP9 3

External Ids for TRP-AGG2-7 Gene

Previous HGNC Symbols for TRP-AGG2-7 Gene

  • TRNAP9
  • TRP-AGG2-5

Previous GeneCards Identifiers for TRP-AGG2-7 Gene

  • GC06P026591
  • GC06P026650
  • GC16M003183
  • GC16M003190
  • GC16M003193
  • GC16M003198

Summaries for TRP-AGG2-7 Gene

GeneCards Summary for TRP-AGG2-7 Gene

TRP-AGG2-7 (Transfer RNA-Pro (AGG) 2-7) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for TRP-AGG2-7 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRP-AGG2-7 Gene

Genomics for TRP-AGG2-7 Gene

Regulatory Elements for TRP-AGG2-7 Gene

Enhancers for TRP-AGG2-7 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16H003182 1.4 ENCODE dbSUPER 0.7 -0.8 -765 2 PKNOX1 ARNT ARID4B SIN3A ZNF2 FOS ZHX2 MXD4 REST ZNF592 ZNF75A ZNF213-AS1 ENSG00000261938 E4F1 CREBBP RNPS1 PDPK2P ZNF597 LOC652276 ZSCAN32
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRP-AGG2-7 on UCSC Golden Path with GeneCards custom track

Promoters for TRP-AGG2-7 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000279476 -94 401 ATF1 ARNT ARID4B SIN3A ZNF2 TCF12 GTF3C2 GLIS2 FOS RUNX3
ENSR00000082621 -1394 201 ATF1 ARNT ARID4B SIN3A GLI4 ZNF2 GTF3C2 KLF7 ATF7 YY2

Genomic Locations for TRP-AGG2-7 Gene

Genomic Locations for TRP-AGG2-7 Gene
chr16:3,182,635-3,182,706
(GRCh38/hg38)
Size:
72 bases
Orientation:
Minus strand
chr16:3,232,635-3,232,706
(GRCh37/hg19)

Genomic View for TRP-AGG2-7 Gene

Genes around TRP-AGG2-7 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRP-AGG2-7 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRP-AGG2-7 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRP-AGG2-7 Gene

Proteins for TRP-AGG2-7 Gene

Post-translational modifications for TRP-AGG2-7 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRP-AGG2-7 Gene

Domains & Families for TRP-AGG2-7 Gene

Gene Families for TRP-AGG2-7 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRP-AGG2-7: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRP-AGG2-7 Gene

Function for TRP-AGG2-7 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRP-AGG2-7 Gene

Localization for TRP-AGG2-7 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRP-AGG2-7 Gene

Pathways & Interactions for TRP-AGG2-7 Gene

SuperPathways for TRP-AGG2-7 Gene

No Data Available

Interacting Proteins for TRP-AGG2-7 Gene

Gene Ontology (GO) - Biological Process for TRP-AGG2-7 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRP-AGG2-7 Gene

Drugs & Compounds for TRP-AGG2-7 Gene

No Compound Related Data Available

Transcripts for TRP-AGG2-7 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRP-AGG2-7 Gene

No ASD Table

Relevant External Links for TRP-AGG2-7 Gene

GeneLoc Exon Structure for
TRP-AGG2-7
ECgene alternative splicing isoforms for
TRP-AGG2-7

No data available for mRNA/cDNA for TRP-AGG2-7 Gene

Expression for TRP-AGG2-7 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRP-AGG2-7 Gene

Orthologs for TRP-AGG2-7 Gene

No data available for Orthologs and Evolution for TRP-AGG2-7 Gene

Paralogs for TRP-AGG2-7 Gene

No data available for Paralogs for TRP-AGG2-7 Gene

Variants for TRP-AGG2-7 Gene

Relevant External Links for TRP-AGG2-7 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRP-AGG2-7

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRP-AGG2-7 Gene

Disorders for TRP-AGG2-7 Gene

No disorders were found for TRP-AGG2-7 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRP-AGG2-7 Gene

Publications for TRP-AGG2-7 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 60

Products for TRP-AGG2-7 Gene

Sources for TRP-AGG2-7 Gene

Content
Loading form....