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Aliases for TRP-AGG2-5 Gene

Subcategory (RNA class) for TRP-AGG2-5 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for TRP-AGG2-5 Gene

  • Transfer RNA-Pro (AGG) 2-5 2 3
  • Transfer RNA Proline 1 (Anticodon AGG) 2 3
  • TRNA Proline 1 (Anticodon AGG) 2 3
  • Transfer RNA-Pro (AGG) 2-3 2 3
  • TRNA-Pro-AGG-2-3 3
  • TRNA Proline 1 2
  • TRP-AGG2-3 3
  • TRNAP1 3
  • TRNP1 3
  • TRP1 3

External Ids for TRP-AGG2-5 Gene

Previous HGNC Symbols for TRP-AGG2-5 Gene

  • TRNP1
  • TRP1
  • TRNAP1
  • TRP-AGG2-3

Previous GeneCards Identifiers for TRP-AGG2-5 Gene

  • GC16M003182

Summaries for TRP-AGG2-5 Gene

GeneCards Summary for TRP-AGG2-5 Gene

TRP-AGG2-5 (Transfer RNA-Pro (AGG) 2-5) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRP-AGG2-5 Gene

Genomics for TRP-AGG2-5 Gene

Regulatory Elements for TRP-AGG2-5 Gene

Enhancers for TRP-AGG2-5 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14F020605 0.5 ENCODE 0.8 +3.0 2978 1.2 ELF3 RAD21 RARA ZNF143 MIXL1 HMG20B ZNF654 MIER2 REST KAT8 RNASE9 RNA5SP382 TEP1 SNORD126 CCNB1IP1 TRP-AGG2-5 RNASE12
GH14F020607 0.5 Ensembl 0.8 +1.4 1407 0.4 ESRRA NR2F1 NR2F6 TRP-AGG2-5 RNASE12
GH14F020608 0.2 ENCODE 0.8 +0.6 555 0.1 CTCF ZNF366 ZNF512 EBF1 TRP-AGG2-5 RNASE12
GH14F020601 0.5 Ensembl 0.4 +7.6 7607 0.4 ARID4B SIN3A DNMT3B ZNF48 RARA ZNF335 THAP11 ZNF263 HMG20B SP3 RNASE9 RNA5SP382 TEP1 SNORD126 CCNB1IP1 TRP-AGG2-5 RNASE12
GH14F020591 0.4 FANTOM5 0.3 +17.5 17536 0.1 ZFHX2 IKZF1 EGR2 OR4K17 OR6S1 RNASE12 OR11H6 OR4N5 OR11H4 RNASE8 EDDM3B RNASE9 RNASE13
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around TRP-AGG2-5 on UCSC Golden Path with GeneCards custom track

Promoters for TRP-AGG2-5 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000096697 -494 1800 PKNOX1 ARNT CREB3L1 MLX ARID4B SIN3A ZNF2 SLC30A9 ZNF143 ZNF207

Genomic Location for TRP-AGG2-5 Gene

20,609,336 bp from pter
20,609,407 bp from pter
72 bases
Minus strand

Genomic View for TRP-AGG2-5 Gene

Genes around TRP-AGG2-5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRP-AGG2-5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRP-AGG2-5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRP-AGG2-5 Gene

Proteins for TRP-AGG2-5 Gene

Post-translational modifications for TRP-AGG2-5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRP-AGG2-5 Gene

Domains & Families for TRP-AGG2-5 Gene

Gene Families for TRP-AGG2-5 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRP-AGG2-5: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRP-AGG2-5 Gene

Function for TRP-AGG2-5 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRP-AGG2-5 Gene

Localization for TRP-AGG2-5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRP-AGG2-5 Gene

Pathways & Interactions for TRP-AGG2-5 Gene

SuperPathways for TRP-AGG2-5 Gene

No Data Available

Interacting Proteins for TRP-AGG2-5 Gene

Gene Ontology (GO) - Biological Process for TRP-AGG2-5 Gene


No data available for Pathways by source and SIGNOR curated interactions for TRP-AGG2-5 Gene

Transcripts for TRP-AGG2-5 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for TRP-AGG2-5 Gene

No ASD Table

Relevant External Links for TRP-AGG2-5 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

No data available for mRNA/cDNA for TRP-AGG2-5 Gene

Expression for TRP-AGG2-5 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TRP-AGG2-5 Gene

Orthologs for TRP-AGG2-5 Gene

No data available for Orthologs and Evolution for TRP-AGG2-5 Gene

Paralogs for TRP-AGG2-5 Gene

No data available for Paralogs for TRP-AGG2-5 Gene

Variants for TRP-AGG2-5 Gene

Relevant External Links for TRP-AGG2-5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRP-AGG2-5 Gene

Disorders for TRP-AGG2-5 Gene

No disorders were found for TRP-AGG2-5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRP-AGG2-5 Gene

Publications for TRP-AGG2-5 Gene

  1. Nucleotide sequence and transcription of a human tRNA gene cluster with four genes. (PMID: 3557125) Chang Y.N. … Pirtle R.M. (Gene 1986) 2 3 64
  2. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan P.P. … Lowe T.M. (Nucleic Acids Res. 2009) 3 64
  3. Mitochondrial DNA polymorphisms in bipolar disorder. (PMID: 11223103) Kato T. … Kato N. (J Affect Disord 2001) 3 64
  4. Dinucleotide repeat in the human mitochondrial D-loop. (PMID: 1301157) Bodenteich A. … Merril C.R. (Hum. Mol. Genet. 1992) 3 64
  5. Differentiation of HT-29 human colonic adenocarcinoma cells correlates with increased expression of mitochondrial RNA: effects of trehalose on cell growth and maturation. (PMID: 1377597) Lu X. … Seligy V.L. (Cancer Res. 1992) 3 64

Products for TRP-AGG2-5 Gene

Sources for TRP-AGG2-5 Gene

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