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Aliases for TRP-AGG2-4 Gene

Subcategory (RNA class) for TRP-AGG2-4 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for TRP-AGG2-4 Gene

  • Transfer RNA-Pro (AGG) 2-4 2 3
  • Transfer RNA Proline 6 (Anticodon AGG) 2 3
  • Transfer RNA-Pro (AGG) 2-2 2 3
  • TRNA-Pro-AGG-2-2 3
  • TRP-AGG2-2 3
  • TRNAP6 3

External Ids for TRP-AGG2-4 Gene

Previous HGNC Symbols for TRP-AGG2-4 Gene

  • TRNAP6
  • TRP-AGG2-2

Previous GeneCards Identifiers for TRP-AGG2-4 Gene

  • GC14M020613

Summaries for TRP-AGG2-4 Gene

GeneCards Summary for TRP-AGG2-4 Gene

TRP-AGG2-4 (Transfer RNA-Pro (AGG) 2-4) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for TRP-AGG2-4 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRP-AGG2-4 Gene

Genomics for TRP-AGG2-4 Gene

Regulatory Elements for TRP-AGG2-4 Gene

Enhancers for TRP-AGG2-4 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11H076233 1.9 FANTOM5 Ensembl ENCODE dbSUPER 0.7 -0.1 -109 4.3 HDGF PKNOX1 ARNT ZFP64 ARID4B SIN3A ZNF2 YY1 ZNF766 ZNF207 EMSY RPS3 WNT11 LOC100506127 ENSG00000272301 ENSG00000255362 TRP-AGG2-4
GH11H076231 1 Ensembl ENCODE 0.7 -3.6 -3628 1.7 HDGF TBL1XR1 MAX ZMYM3 EBF1 ZIC2 EED RUNX3 IKZF2 CHD2 ENSG00000254933 TRP-AGG2-4 ENSG00000255362
GH11H076224 0.8 ENCODE 0.4 -8.5 -8531 5 BCOR TBP SAP130 TAF1 ZMYM3 MAX CEBPG RAD21 YY1 TEAD3 ENSG00000254933 TRP-AGG2-4 ENSG00000255362
GH11H076215 0.4 ENCODE 0.4 -19.4 -19386 0.9 RFX1 ENSG00000261578 ENSG00000255362 TRP-AGG2-4
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRP-AGG2-4 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRP-AGG2-4 Gene

Genomic Locations for TRP-AGG2-4 Gene
chr11:76,235,513-76,235,584
(GRCh38/hg38)
Size:
72 bases
Orientation:
Plus strand
chr11:75,946,557-75,946,628
(GRCh37/hg19)

Genomic View for TRP-AGG2-4 Gene

Genes around TRP-AGG2-4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRP-AGG2-4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRP-AGG2-4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRP-AGG2-4 Gene

Proteins for TRP-AGG2-4 Gene

Post-translational modifications for TRP-AGG2-4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRP-AGG2-4 Gene

Domains & Families for TRP-AGG2-4 Gene

Gene Families for TRP-AGG2-4 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRP-AGG2-4: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRP-AGG2-4 Gene

Function for TRP-AGG2-4 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRP-AGG2-4 Gene

Localization for TRP-AGG2-4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRP-AGG2-4 Gene

Pathways & Interactions for TRP-AGG2-4 Gene

SuperPathways for TRP-AGG2-4 Gene

No Data Available

Interacting Proteins for TRP-AGG2-4 Gene

Gene Ontology (GO) - Biological Process for TRP-AGG2-4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRP-AGG2-4 Gene

Drugs & Compounds for TRP-AGG2-4 Gene

No Compound Related Data Available

Transcripts for TRP-AGG2-4 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRP-AGG2-4 Gene

No ASD Table

Relevant External Links for TRP-AGG2-4 Gene

GeneLoc Exon Structure for
TRP-AGG2-4
ECgene alternative splicing isoforms for
TRP-AGG2-4

No data available for mRNA/cDNA for TRP-AGG2-4 Gene

Expression for TRP-AGG2-4 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRP-AGG2-4 Gene

Orthologs for TRP-AGG2-4 Gene

No data available for Orthologs and Evolution for TRP-AGG2-4 Gene

Paralogs for TRP-AGG2-4 Gene

No data available for Paralogs for TRP-AGG2-4 Gene

Variants for TRP-AGG2-4 Gene

Relevant External Links for TRP-AGG2-4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRP-AGG2-4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRP-AGG2-4 Gene

Disorders for TRP-AGG2-4 Gene

No disorders were found for TRP-AGG2-4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRP-AGG2-4 Gene

Publications for TRP-AGG2-4 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 60

Products for TRP-AGG2-4 Gene

Sources for TRP-AGG2-4 Gene

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