Free for academic non-profit institutions. Other users need a Commercial license

Aliases for TRP-AGG2-3 Gene

Subcategory (RNA class) for TRP-AGG2-3 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for TRP-AGG2-3 Gene

  • Transfer RNA-Pro (AGG) 2-3 2 3
  • Transfer RNA Proline 15 (Anticodon AGG) 2 3
  • Transfer RNA-Pro (AGG) 2-8 2 3
  • TRNA-Pro-AGG-2-8 3
  • TRP-AGG2-8 3
  • TRNAP15 3

External Ids for TRP-AGG2-3 Gene

Previous HGNC Symbols for TRP-AGG2-3 Gene

  • TRNAP15
  • TRP-AGG2-8

Previous GeneCards Identifiers for TRP-AGG2-3 Gene

  • GC14M020609
  • GC07P128785
  • GC07P128786
  • GC07P128835

Summaries for TRP-AGG2-3 Gene

GeneCards Summary for TRP-AGG2-3 Gene

TRP-AGG2-3 (Transfer RNA-Pro (AGG) 2-3) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRP-AGG2-3 Gene

Genomics for TRP-AGG2-3 Gene

Regulatory Elements for TRP-AGG2-3 Gene

Enhancers for TRP-AGG2-3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G128782 1.4 Ensembl ENCODE 0.7 -0.2 -164 1.3 HNRNPUL1 HDGF PKNOX1 FOXA2 CREB3L1 MLX ARNT ZFP64 SIN3A ARID4B ENSG00000242588 ENSG00000243302 ENSG00000230715 ENSG00000243679 ENSG00000229413 RPS10P15 CDC26P1 RN7SL81P RBM28 TNPO3
GH07G128780 0.9 ENCODE dbSUPER 0.7 -1.8 -1827 1.7 MCM3 ZNF740 ZSCAN4 SAP30 ZNF155 ZFHX2 ZNF341 MLLT1 ZNF24 EGR2 RBM28 OPN1SW ENSG00000242588 RN7SL81P METTL2B GC07P128871 PIR38121 TRP-AGG2-3
GH07G128790 0.6 ENCODE 0.4 +7.1 7055 0.1 CTCF ZNF766 POLR2A REST MNT RAD21 EZH2 CCDC136 TRP-AGG2-3
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRP-AGG2-3 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRP-AGG2-3 Gene

Chromosome:
7
Start:
128,783,450 bp from pter
End:
128,783,521 bp from pter
Size:
72 bases
Orientation:
Plus strand

Genomic View for TRP-AGG2-3 Gene

Genes around TRP-AGG2-3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRP-AGG2-3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRP-AGG2-3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRP-AGG2-3 Gene

Proteins for TRP-AGG2-3 Gene

Post-translational modifications for TRP-AGG2-3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRP-AGG2-3 Gene

Domains & Families for TRP-AGG2-3 Gene

Gene Families for TRP-AGG2-3 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRP-AGG2-3: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRP-AGG2-3 Gene

Function for TRP-AGG2-3 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRP-AGG2-3 Gene

Localization for TRP-AGG2-3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRP-AGG2-3 Gene

Pathways & Interactions for TRP-AGG2-3 Gene

SuperPathways for TRP-AGG2-3 Gene

No Data Available

Interacting Proteins for TRP-AGG2-3 Gene

Gene Ontology (GO) - Biological Process for TRP-AGG2-3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRP-AGG2-3 Gene

Drugs & Compounds for TRP-AGG2-3 Gene

No Compound Related Data Available

Transcripts for TRP-AGG2-3 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRP-AGG2-3 Gene

No ASD Table

Relevant External Links for TRP-AGG2-3 Gene

GeneLoc Exon Structure for
TRP-AGG2-3
ECgene alternative splicing isoforms for
TRP-AGG2-3

No data available for mRNA/cDNA for TRP-AGG2-3 Gene

Expression for TRP-AGG2-3 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRP-AGG2-3 Gene

Orthologs for TRP-AGG2-3 Gene

No data available for Orthologs and Evolution for TRP-AGG2-3 Gene

Paralogs for TRP-AGG2-3 Gene

No data available for Paralogs for TRP-AGG2-3 Gene

Variants for TRP-AGG2-3 Gene

Relevant External Links for TRP-AGG2-3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRP-AGG2-3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRP-AGG2-3 Gene

Disorders for TRP-AGG2-3 Gene

No disorders were found for TRP-AGG2-3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRP-AGG2-3 Gene

Publications for TRP-AGG2-3 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan P.P. … Lowe T.M. (Nucleic Acids Res. 2009) 3 64

Products for TRP-AGG2-3 Gene

Sources for TRP-AGG2-3 Gene

Content
Loading form....