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Aliases for TRP-AGG1-1 Gene

Subcategory (RNA class) for TRP-AGG1-1 Gene

tRNA

Quality Score for this RNA gene is

2

Aliases for TRP-AGG1-1 Gene

  • Transfer RNA-Pro (AGG) 1-1 2 3
  • Transfer RNA Proline 5 (Anticodon AGG) 2 3
  • TRNA-Pro-AGG-1-1 3
  • TRNAP5 3

External Ids for TRP-AGG1-1 Gene

ORGUL Members for TRP-AGG1-1 Gene

Previous HGNC Symbols for TRP-AGG1-1 Gene

  • TRNAP5

Previous GeneCards Identifiers for TRP-AGG1-1 Gene

  • GC16P003192
  • GC16P003232

Summaries for TRP-AGG1-1 Gene

GeneCards Summary for TRP-AGG1-1 Gene

TRP-AGG1-1 (Transfer RNA-Pro (AGG) 1-1) is an RNA Gene, and is affiliated with the tRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRP-AGG1-1 Gene

Genomics for TRP-AGG1-1 Gene

Regulatory Elements for TRP-AGG1-1 Gene


Promoters for TRP-AGG1-1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around TRP-AGG1-1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRP-AGG1-1 Gene

Chromosome:
16
Start:
3,191,989 bp from pter
End:
3,192,060 bp from pter
Size:
72 bases
Orientation:
Plus strand

Genomic View for TRP-AGG1-1 Gene

Genes around TRP-AGG1-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRP-AGG1-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRP-AGG1-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRP-AGG1-1 Gene

Proteins for TRP-AGG1-1 Gene

Post-translational modifications for TRP-AGG1-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRP-AGG1-1 Gene

Domains & Families for TRP-AGG1-1 Gene

Gene Families for TRP-AGG1-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRP-AGG1-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRP-AGG1-1 Gene

Function for TRP-AGG1-1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRP-AGG1-1 Gene

Localization for TRP-AGG1-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRP-AGG1-1 Gene

Pathways & Interactions for TRP-AGG1-1 Gene

SuperPathways for TRP-AGG1-1 Gene

No Data Available

Interacting Proteins for TRP-AGG1-1 Gene

Gene Ontology (GO) - Biological Process for TRP-AGG1-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRP-AGG1-1 Gene

Drugs & Compounds for TRP-AGG1-1 Gene

No Compound Related Data Available

Transcripts for TRP-AGG1-1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for TRP-AGG1-1 Gene

No ASD Table

Relevant External Links for TRP-AGG1-1 Gene

GeneLoc Exon Structure for
TRP-AGG1-1
ECgene alternative splicing isoforms for
TRP-AGG1-1

No data available for mRNA/cDNA for TRP-AGG1-1 Gene

Expression for TRP-AGG1-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for TRP-AGG1-1 Gene

Orthologs for TRP-AGG1-1 Gene

No data available for Orthologs and Evolution for TRP-AGG1-1 Gene

Paralogs for TRP-AGG1-1 Gene

No data available for Paralogs for TRP-AGG1-1 Gene

Variants for TRP-AGG1-1 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for TRP-AGG1-1 Gene

Disorders for TRP-AGG1-1 Gene

No disorders were found for TRP-AGG1-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRP-AGG1-1 Gene

Publications for TRP-AGG1-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan P.P. … Lowe T.M. (Nucleic Acids Res. 2009) 3 67

Products for TRP-AGG1-1 Gene

Sources for TRP-AGG1-1 Gene

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