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Aliases for TRN-GTT7-1 Gene

Subcategory (RNA class) for TRN-GTT7-1 Gene


Quality Score for this RNA gene is


Aliases for TRN-GTT7-1 Gene

  • Transfer RNA-Asn (GTT) 7-1 2 3
  • Transfer RNA Asparagine 5 (Anticodon GUU) 2 3
  • TRNA-Asn-GTT-7-1 3
  • TRNAN5 3

External Ids for TRN-GTT7-1 Gene

ORGUL Members for TRN-GTT7-1 Gene

Previous HGNC Symbols for TRN-GTT7-1 Gene

  • TRNAN5

Summaries for TRN-GTT7-1 Gene

GeneCards Summary for TRN-GTT7-1 Gene

TRN-GTT7-1 (Transfer RNA-Asn (GTT) 7-1) is an RNA Gene, and is affiliated with the tRNA class.

fRNAdb sequence ontologies for TRN-GTT7-1 Gene

  • tRNA: Transfer RNA (tRNA) molecules are approximately 80 nucleotides in length. Their secondary structure includes four short double-helical elements and three loops (D, anti-codon, and T loops). Further hydrogen bonds mediate the characteristic L-shaped molecular structure. tRNAs have two regions of fundamental functional importance: the anti-codon, which is responsible for specific mRNA codon recognition, and the 3' end, to which the tRNAs corresponding amino acid is attached (by aminoacyl-tRNA synthetases). tRNAs cope with the degeneracy of the genetic code in two manners: having more than one tRNA (with a specific anti-codon) for a particular amino acid; and 'wobble' base-pairing, i.e. permitting non-standard base-pairing at the 3rd anti-codon position.

Additional gene information for TRN-GTT7-1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for TRN-GTT7-1 Gene

Genomics for TRN-GTT7-1 Gene

Regulatory Elements for TRN-GTT7-1 Gene

Enhancers for TRN-GTT7-1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H120843 1.5 FANTOM5 Ensembl ENCODE 0.7 -0.4 -411 2.1 HDGF PKNOX1 ATF1 MLX ARNT GTF3C2 ZNF143 ZNF207 ATF7 RUNX3 TRN-GTT7-1 GC01M120846
GH01H120773 0.2 Ensembl 0.2 +69.9 69935 2 LOC101929796 TRN-GTT7-1
GH01H120776 0.2 Ensembl 0.2 +66.4 66357 2.8 LOC101929796 TRN-GTT7-1
GH01H120795 0.2 Ensembl 0.2 +48.9 48886 0.9 TRN-GTT7-1 LOC101929796
GH01H120799 0.2 Ensembl 0.2 +45.0 45034 0.6 TRN-GTT7-1 LOC101929796
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRN-GTT7-1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRN-GTT7-1 Gene

Genomic Locations for TRN-GTT7-1 Gene
74 bases
Minus strand

Genomic View for TRN-GTT7-1 Gene

Genes around TRN-GTT7-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRN-GTT7-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRN-GTT7-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRN-GTT7-1 Gene

ORGUL Member Location for TRN-GTT7-1 Gene

ORGUL Member Location for TRN-GTT7-1 gene

Proteins for TRN-GTT7-1 Gene

Post-translational modifications for TRN-GTT7-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRN-GTT7-1 Gene

Domains & Families for TRN-GTT7-1 Gene

Gene Families for TRN-GTT7-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRN-GTT7-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRN-GTT7-1 Gene

Function for TRN-GTT7-1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRN-GTT7-1 Gene

Localization for TRN-GTT7-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRN-GTT7-1 Gene

Pathways & Interactions for TRN-GTT7-1 Gene

SuperPathways for TRN-GTT7-1 Gene

No Data Available

Interacting Proteins for TRN-GTT7-1 Gene

Gene Ontology (GO) - Biological Process for TRN-GTT7-1 Gene


No data available for Pathways by source and SIGNOR curated interactions for TRN-GTT7-1 Gene

Drugs & Compounds for TRN-GTT7-1 Gene

No Compound Related Data Available

Transcripts for TRN-GTT7-1 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRN-GTT7-1 Gene

No ASD Table

Relevant External Links for TRN-GTT7-1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

No data available for mRNA/cDNA for TRN-GTT7-1 Gene

Expression for TRN-GTT7-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRN-GTT7-1 Gene

Orthologs for TRN-GTT7-1 Gene

No data available for Orthologs and Evolution for TRN-GTT7-1 Gene

Paralogs for TRN-GTT7-1 Gene

No data available for Paralogs for TRN-GTT7-1 Gene

Variants for TRN-GTT7-1 Gene

Relevant External Links for TRN-GTT7-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRN-GTT7-1 Gene

Disorders for TRN-GTT7-1 Gene

No disorders were found for TRN-GTT7-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRN-GTT7-1 Gene

Publications for TRN-GTT7-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 60
  2. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. (PMID: 9023104) Lowe TM … Eddy SR (Nucleic acids research 1997) 1
  3. The tertiary structure of tRNA and the development of the genetic code. (PMID: 8256282) Hou YM (Trends in biochemical sciences 1993) 1

Products for TRN-GTT7-1 Gene

Sources for TRN-GTT7-1 Gene

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