Free for academic non-profit institutions. Other users need a Commercial license

Aliases for TRN-GTT7-1 Gene

Subcategory (RNA class) for TRN-GTT7-1 Gene


Quality Score for this RNA gene is


Aliases for TRN-GTT7-1 Gene

  • Transfer RNA-Asn (GTT) 7-1 2 3
  • Transfer RNA Asparagine 5 (Anticodon GUU) 2 3
  • TRNA-Asn-GTT-7-1 3
  • TRNAN5 3

External Ids for TRN-GTT7-1 Gene

ORGUL Members for TRN-GTT7-1 Gene

Previous HGNC Symbols for TRN-GTT7-1 Gene

  • TRNAN5

Summaries for TRN-GTT7-1 Gene

GeneCards Summary for TRN-GTT7-1 Gene

TRN-GTT7-1 (Transfer RNA-Asn (GTT) 7-1) is an RNA Gene, and is affiliated with the tRNA class.

fRNAdb sequence ontologies for TRN-GTT7-1 Gene

  • tRNA: Transfer RNA (tRNA) molecules are approximately 80 nucleotides in length. Their secondary structure includes four short double-helical elements and three loops (D, anti-codon, and T loops). Further hydrogen bonds mediate the characteristic L-shaped molecular structure. tRNAs have two regions of fundamental functional importance: the anti-codon, which is responsible for specific mRNA codon recognition, and the 3' end, to which the tRNAs corresponding amino acid is attached (by aminoacyl-tRNA synthetases). tRNAs cope with the degeneracy of the genetic code in two manners: having more than one tRNA (with a specific anti-codon) for a particular amino acid; and 'wobble' base-pairing, i.e. permitting non-standard base-pairing at the 3rd anti-codon position.

Additional gene information for TRN-GTT7-1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for TRN-GTT7-1 Gene

Genomics for TRN-GTT7-1 Gene

GeneHancer (GH) Regulatory Elements for TRN-GTT7-1 Gene

Promoters and enhancers for TRN-GTT7-1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I120843 Enhancer 1.4 FANTOM5 Ensembl ENCODE 550.8 -0.4 -410 2.1 HDGF PKNOX1 ATF1 MLX ARNT ZNF48 NCOA2 GTF3C2 ZNF207 ZNF143 GC01M120846 TRN-GTT7-1
GH01I120723 Promoter 0.5 Ensembl 0.1 +119.7 119734 2.4 LOC101929796 NBPF26 LOC105378944 LOC105378943 TRN-GTT7-1
GH01I120795 Enhancer 0.2 Ensembl 0.2 +48.9 48886 0.9 TRN-GTT7-1 LOC101929796 NBPF26
GH01I120799 Enhancer 0.2 Ensembl 0.2 +45.0 45034 0.6 TRN-GTT7-1 LOC101929796 NBPF26
GH01I120794 Enhancer 0.2 Ensembl 0.2 +50.1 50134 0.4 TRN-GTT7-1 LOC101929796 NBPF26
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TRN-GTT7-1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRN-GTT7-1 Gene

Genomic Locations for TRN-GTT7-1 Gene
74 bases
Minus strand

Genomic View for TRN-GTT7-1 Gene

Genes around TRN-GTT7-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRN-GTT7-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRN-GTT7-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRN-GTT7-1 Gene

ORGUL Member Location for TRN-GTT7-1 Gene

ORGUL Member Location for TRN-GTT7-1 gene

Proteins for TRN-GTT7-1 Gene

Post-translational modifications for TRN-GTT7-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRN-GTT7-1 Gene

Domains & Families for TRN-GTT7-1 Gene

Gene Families for TRN-GTT7-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRN-GTT7-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRN-GTT7-1 Gene

Function for TRN-GTT7-1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRN-GTT7-1 Gene

Localization for TRN-GTT7-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRN-GTT7-1 Gene

Pathways & Interactions for TRN-GTT7-1 Gene

SuperPathways for TRN-GTT7-1 Gene

No Data Available

Interacting Proteins for TRN-GTT7-1 Gene

Gene Ontology (GO) - Biological Process for TRN-GTT7-1 Gene


No data available for Pathways by source and SIGNOR curated interactions for TRN-GTT7-1 Gene

Drugs & Compounds for TRN-GTT7-1 Gene

No Compound Related Data Available

Transcripts for TRN-GTT7-1 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRN-GTT7-1 Gene

No ASD Table

Relevant External Links for TRN-GTT7-1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

No data available for mRNA/cDNA for TRN-GTT7-1 Gene

Expression for TRN-GTT7-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRN-GTT7-1 Gene

Orthologs for TRN-GTT7-1 Gene

No data available for Orthologs and Evolution for TRN-GTT7-1 Gene

Paralogs for TRN-GTT7-1 Gene

No data available for Paralogs for TRN-GTT7-1 Gene

Variants for TRN-GTT7-1 Gene

Additional Variant Information for TRN-GTT7-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRN-GTT7-1 Gene

Disorders for TRN-GTT7-1 Gene

No disorders were found for TRN-GTT7-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRN-GTT7-1 Gene

Publications for TRN-GTT7-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 58
  2. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. (PMID: 9023104) Lowe TM … Eddy SR (Nucleic acids research 1997) 1
  3. The tertiary structure of tRNA and the development of the genetic code. (PMID: 8256282) Hou YM (Trends in biochemical sciences 1993) 1

Products for TRN-GTT7-1 Gene

Sources for TRN-GTT7-1 Gene

Loading form....