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Aliases for TRN-GTT2-1 Gene

Subcategory (RNA class) for TRN-GTT2-1 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for TRN-GTT2-1 Gene

  • Transfer RNA-Asn (GTT) 2-1 2 3
  • Transfer RNA Asparagine 1 (Anticodon GUU) 2 3
  • TRNA Asparagine 1 (Anticodon GUU) 2 3
  • TRNAN1 3 6
  • TRN1 3 6
  • TRN 3 6
  • TRNA-Asn-GTT-2-1 3
  • TRNA Asparagine 2
  • RNN 3

External Ids for TRN-GTT2-1 Gene

Previous HGNC Symbols for TRN-GTT2-1 Gene

  • RNN
  • TRN
  • TRN1
  • TRNAN1

Summaries for TRN-GTT2-1 Gene

Entrez Gene Summary for TRN-GTT2-1 Gene

  • The saturation hybridization studies of Hatlen and Attardi (1971) [PubMed 4929578] indicated a copy number of tRNA genes of 1,300 for the haploid human genome--an average of 65 gene copies for each tRNA species. These genes tend to be clustered, an arrangement that would facilitate the exchange of sequence information and enable them to evolve together.[supplied by OMIM, Sep 2009]

GeneCards Summary for TRN-GTT2-1 Gene

TRN-GTT2-1 (Transfer RNA-Asn (GTT) 2-1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRN-GTT2-1 Gene

Genomics for TRN-GTT2-1 Gene

Genomic Location for TRN-GTT2-1 Gene

Start:
145,287,766 bp from pter
End:
145,287,839 bp from pter
Size:
74 bases
Orientation:
Plus strand

Genomic View for TRN-GTT2-1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TRN-GTT2-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRN-GTT2-1 Gene

No data available for Regulatory Elements for TRN-GTT2-1 Gene

Proteins for TRN-GTT2-1 Gene

Post-translational modifications for TRN-GTT2-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRN-GTT2-1 Gene

Domains for TRN-GTT2-1 Gene

Gene Families for TRN-GTT2-1 Gene

HGNC:
  • TRNA :ncRNAs / Transfer RNA, cytoplasmic

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRN-GTT2-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRN-GTT2-1 Gene

Function for TRN-GTT2-1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for TRN-GTT2-1 Gene

Localization for TRN-GTT2-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRN-GTT2-1 Gene

Pathways for TRN-GTT2-1 Gene

SuperPathways for TRN-GTT2-1 Gene

No Data Available

Interacting Proteins for TRN-GTT2-1 Gene

Gene Ontology (GO) - Biological Process for TRN-GTT2-1 Gene

None

No data available for Pathways by source for TRN-GTT2-1 Gene

Transcripts for TRN-GTT2-1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for TRN-GTT2-1 Gene

No ASD Table

Relevant External Links for TRN-GTT2-1 Gene

GeneLoc Exon Structure for
TRN-GTT2-1
ECgene alternative splicing isoforms for
TRN-GTT2-1

No data available for mRNA/cDNA for TRN-GTT2-1 Gene

Expression for TRN-GTT2-1 Gene

No Expression Related Data Available

In Situ Assay Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for TRN-GTT2-1 Gene

Orthologs for TRN-GTT2-1 Gene

No data available for Orthologs and Evolution for TRN-GTT2-1 Gene

Paralogs for TRN-GTT2-1 Gene

No data available for Paralogs for TRN-GTT2-1 Gene

Variants for TRN-GTT2-1 Gene

Relevant External Links for TRN-GTT2-1 Gene

HapMap Linkage Disequilibrium report
TRN-GTT2-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for TRN-GTT2-1 Gene

Disorders for TRN-GTT2-1 Gene

No disorders were found for TRN-GTT2-1 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for TRN-GTT2-1 Gene

Publications for TRN-GTT2-1 Gene

  1. Genomic organization of the human asparagine transfer RNA genes: localization to the U1 RNA gene and class I pseudogene repeat units. (PMID: 2757033) Buckland R.A. (Am. J. Hum. Genet. 1989) 3
  2. Proportion of HeLa cell genome complementary to transfer RNA and 5 s RNA. (PMID: 4929578) Hatlen L. … Attardi G. (J. Mol. Biol. 1971) 3
  3. Structural comparison of human, bovine, rat, and Walker 256 carcinosarcoma asparaginyl-tRNA. (PMID: 6783075) Chen E.Y. … Roe B.A. (Biochim. Biophys. Acta 1980) 3
  4. Functional conservation of the transportin nuclear import pathway in divergent organisms. (PMID: 9632798) Siomi M.C. … Dreyfuss G. (Mol. Cell. Biol. 1998) 3
  5. Nup153 is an M9-containing mobile nucleoporin with a novel Ran-binding domain. (PMID: 10202161) Nakielny S. … Dreyfuss G. (EMBO J. 1999) 3

Products for TRN-GTT2-1 Gene

Sources for TRN-GTT2-1 Gene

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