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Aliases for TRN-GTT1-1 Gene

Subcategory (RNA class) for TRN-GTT1-1 Gene

tRNA

Quality Score for this RNA gene is

2

Aliases for TRN-GTT1-1 Gene

  • Transfer RNA-Asn (GTT) 1-1 2 3
  • Transfer RNA Asparagine 14 (Anticodon GUU) 2 3
  • TRNA-Asn-GTT-1-1 3
  • TRNAN14 3

External Ids for TRN-GTT1-1 Gene

ORGUL Members for TRN-GTT1-1 Gene

Previous HGNC Symbols for TRN-GTT1-1 Gene

  • TRNAN14

Summaries for TRN-GTT1-1 Gene

GeneCards Summary for TRN-GTT1-1 Gene

TRN-GTT1-1 (Transfer RNA-Asn (GTT) 1-1) is an RNA Gene, and is affiliated with the tRNA class.

Additional gene information for TRN-GTT1-1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRN-GTT1-1 Gene

Genomics for TRN-GTT1-1 Gene

Regulatory Elements for TRN-GTT1-1 Gene

Enhancers for TRN-GTT1-1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H161539 1.6 Ensembl ENCODE dbSUPER 0.7 +1.6 1555 4 HDGF PKNOX1 ARNT ARID4B SIN3A FEZF1 ZNF2 YY1 SLC30A9 ZNF766 USP21 DUSP12 DEDD FCGR2C B4GALT3 ARHGAP30 FCGR2A FCRLB SLAMF7 ATF6
GH01H161544 1.1 Ensembl ENCODE dbSUPER 0.4 +7.4 7360 6 JUND PKNOX1 FOXK2 CEBPB CEBPG HNF4A ZBTB40 FCGR2C FCGR2A FCRLA FCRLB HSPA7 FCGR2B RPS23P10 FCGR3B FCGR3A TRN-GTT1-1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRN-GTT1-1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRN-GTT1-1 Gene

Chromosome:
1
Start:
161,540,241 bp from pter
End:
161,540,314 bp from pter
Size:
74 bases
Orientation:
Plus strand

Genomic View for TRN-GTT1-1 Gene

Genes around TRN-GTT1-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRN-GTT1-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRN-GTT1-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRN-GTT1-1 Gene

Proteins for TRN-GTT1-1 Gene

Post-translational modifications for TRN-GTT1-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRN-GTT1-1 Gene

Domains & Families for TRN-GTT1-1 Gene

Gene Families for TRN-GTT1-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRN-GTT1-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRN-GTT1-1 Gene

Function for TRN-GTT1-1 Gene

Phenotypes From GWAS Catalog for TRN-GTT1-1 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TRN-GTT1-1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRN-GTT1-1 Gene

Localization for TRN-GTT1-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRN-GTT1-1 Gene

Pathways & Interactions for TRN-GTT1-1 Gene

SuperPathways for TRN-GTT1-1 Gene

No Data Available

Interacting Proteins for TRN-GTT1-1 Gene

Gene Ontology (GO) - Biological Process for TRN-GTT1-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRN-GTT1-1 Gene

Drugs & Compounds for TRN-GTT1-1 Gene

No Compound Related Data Available

Transcripts for TRN-GTT1-1 Gene

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TRN-GTT1-1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for TRN-GTT1-1 Gene

No ASD Table

Relevant External Links for TRN-GTT1-1 Gene

GeneLoc Exon Structure for
TRN-GTT1-1
ECgene alternative splicing isoforms for
TRN-GTT1-1

No data available for mRNA/cDNA for TRN-GTT1-1 Gene

Expression for TRN-GTT1-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRN-GTT1-1 Gene

Orthologs for TRN-GTT1-1 Gene

No data available for Orthologs and Evolution for TRN-GTT1-1 Gene

Paralogs for TRN-GTT1-1 Gene

No data available for Paralogs for TRN-GTT1-1 Gene

Variants for TRN-GTT1-1 Gene

Relevant External Links for TRN-GTT1-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRN-GTT1-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRN-GTT1-1 Gene

Disorders for TRN-GTT1-1 Gene

No disorders were found for TRN-GTT1-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRN-GTT1-1 Gene

Publications for TRN-GTT1-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 60

Products for TRN-GTT1-1 Gene

Sources for TRN-GTT1-1 Gene

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