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Aliases for TRMT2B-AS1 Gene

Subcategory (RNA class) for TRMT2B-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for TRMT2B-AS1 Gene

  • TRMT2B Antisense RNA 1 2 3 5
  • TRMT2B Antisense RNA 1 (Non-Protein Coding) 2

External Ids for TRMT2B-AS1 Gene

Previous GeneCards Identifiers for TRMT2B-AS1 Gene

  • GC00U933540
  • GC0XP100298
  • GC0XM100298

Summaries for TRMT2B-AS1 Gene

GeneCards Summary for TRMT2B-AS1 Gene

TRMT2B-AS1 (TRMT2B Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for TRMT2B-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRMT2B-AS1 Gene

Genomics for TRMT2B-AS1 Gene

GeneHancer (GH) Regulatory Elements for TRMT2B-AS1 Gene

Promoters and enhancers for TRMT2B-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XI101051 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 0.3 +42.6 42605 1.7 ATF1 SIN3A FEZF1 DMAP1 YY1 POLR2B ZNF213 SP3 NFYC KAT8 TRMT2B GLA TRMT2B-AS1 ARL13A
GH0XI101078 Promoter/Enhancer 1 Ensembl ENCODE 0.4 +15.3 15275 1.2 SP1 MXI1 POLR2A ZNF143 TMEM35A TRMT2B-AS1
GH0XI101056 Enhancer 0.9 Ensembl ENCODE 0.3 +37.2 37191 0.6 PKNOX1 JUN TEAD4 TAL1 CEBPG BATF IRF4 FOSL1 TCF12 CTBP1 TMEM35A TRMT2B TRMT2B-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TRMT2B-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRMT2B-AS1 Gene

Genomic Locations for TRMT2B-AS1 Gene
chrX:101,043,564-101,094,476
(GRCh38/hg38)
Size:
50,913 bases
Orientation:
Minus strand
chrX:100,298,553-100,349,465
(GRCh37/hg19)

Genomic View for TRMT2B-AS1 Gene

Genes around TRMT2B-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRMT2B-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRMT2B-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for TRMT2B-AS1 Gene

Proteins for TRMT2B-AS1 Gene

Post-translational modifications for TRMT2B-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRMT2B-AS1 Gene

Domains & Families for TRMT2B-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRMT2B-AS1 Gene

Function for TRMT2B-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRMT2B-AS1 Gene

Localization for TRMT2B-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRMT2B-AS1 Gene

Pathways & Interactions for TRMT2B-AS1 Gene

SuperPathways for TRMT2B-AS1 Gene

No Data Available

Interacting Proteins for TRMT2B-AS1 Gene

Gene Ontology (GO) - Biological Process for TRMT2B-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRMT2B-AS1 Gene

Drugs & Compounds for TRMT2B-AS1 Gene

No Compound Related Data Available

Transcripts for TRMT2B-AS1 Gene

mRNA/cDNA for TRMT2B-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRMT2B-AS1 Gene

No ASD Table

Relevant External Links for TRMT2B-AS1 Gene

GeneLoc Exon Structure for
TRMT2B-AS1
ECgene alternative splicing isoforms for
TRMT2B-AS1

Expression for TRMT2B-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TRMT2B-AS1 Gene

genes like me logo Genes that share expression patterns with TRMT2B-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRMT2B-AS1 Gene

Orthologs for TRMT2B-AS1 Gene

Evolution for TRMT2B-AS1 Gene

ENSEMBL:
Gene Tree for TRMT2B-AS1 (if available)
TreeFam:
Gene Tree for TRMT2B-AS1 (if available)

No data available for Orthologs for TRMT2B-AS1 Gene

Paralogs for TRMT2B-AS1 Gene

No data available for Paralogs for TRMT2B-AS1 Gene

Variants for TRMT2B-AS1 Gene

Additional Variant Information for TRMT2B-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRMT2B-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRMT2B-AS1 Gene

Disorders for TRMT2B-AS1 Gene

No disorders were found for TRMT2B-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRMT2B-AS1 Gene

Publications for TRMT2B-AS1 Gene

No publications were found for TRMT2B-AS1 Gene.

Products for TRMT2B-AS1 Gene

Sources for TRMT2B-AS1 Gene

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