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Aliases for TRMT112P6 Gene

Aliases for TRMT112P6 Gene

  • TRNA Methyltransferase 11-2 Homolog (S. Cerevisiae) Pseudogene 6 2 3

External Ids for TRMT112P6 Gene

Previous GeneCards Identifiers for TRMT112P6 Gene

  • GC02M026251

Summaries for TRMT112P6 Gene

GeneCards Summary for TRMT112P6 Gene

TRMT112P6 (TRNA Methyltransferase 11-2 Homolog (S. Cerevisiae) Pseudogene 6) is a Pseudogene. An important paralog of this gene is TRMT112.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRMT112P6 Gene

Genomics for TRMT112P6 Gene

Genomic Location for TRMT112P6 Gene

Start:
26,028,033 bp from pter
End:
26,028,624 bp from pter
Size:
592 bases
Orientation:
Minus strand

Genomic View for TRMT112P6 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TRMT112P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRMT112P6 Gene

No data available for Regulatory Elements for TRMT112P6 Gene

Proteins for TRMT112P6 Gene

Post-translational modifications for TRMT112P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRMT112P6 Gene

Domains for TRMT112P6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRMT112P6 Gene

Function for TRMT112P6 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for TRMT112P6 Gene

Localization for TRMT112P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRMT112P6 Gene

Pathways for TRMT112P6 Gene

SuperPathways for TRMT112P6 Gene

No Data Available

Interacting Proteins for TRMT112P6 Gene

Gene Ontology (GO) - Biological Process for TRMT112P6 Gene

None

No data available for Pathways by source for TRMT112P6 Gene

Transcripts for TRMT112P6 Gene

mRNA/cDNA for TRMT112P6 Gene

(3) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate TRMT112P6
    • Block miRNA regulation of TRMT112P6 using miScript Target Protectors

    Primer Products

    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for TRMT112P6 Gene

    No ASD Table

    Relevant External Links for TRMT112P6 Gene

    GeneLoc Exon Structure for
    TRMT112P6
    ECgene alternative splicing isoforms for
    TRMT112P6

    Expression for TRMT112P6 Gene

    mRNA expression in normal human tissues for TRMT112P6 Gene

    genes like me logo Genes that share expressions with TRMT112P6: view

    In Situ Assay Products

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for TRMT112P6 Gene

    Orthologs for TRMT112P6 Gene

    This gene was present in the common ancestor of animals and fungi.

    Orthologs for TRMT112P6 Gene

    Organism Taxonomy Gene Similarity Type Details
    chimpanzee
    (Pan troglodytes)
    Mammalia -- 36
    • 98 (a)
    OneToOne
    cow
    (Bos Taurus)
    Mammalia -- 36
    • 73 (a)
    ManyToMany
    dog
    (Canis familiaris)
    Mammalia -- 36
    • 79 (a)
    OneToMany
    mouse
    (Mus musculus)
    Mammalia Trmt112 36
    • 77 (a)
    OneToMany
    Trmt112-ps2 16
    lizard
    (Anolis carolinensis)
    Reptilia -- 36
    • 62 (a)
    OneToMany
    zebrafish
    (Danio rerio)
    Actinopterygii trmt112 36
    • 59 (a)
    OneToMany
    fruit fly
    (Drosophila melanogaster)
    Insecta CG12975 36
    • 48 (a)
    OneToMany
    worm
    (Caenorhabditis elegans)
    Secernentea C04H5.1 36
    • 34 (a)
    OneToMany
    baker's yeast
    (Saccharomyces cerevisiae)
    Saccharomycetes TRM112 36
    • 28 (a)
    OneToMany
    sea squirt
    (Ciona savignyi)
    Ascidiacea CSA.6839 36
    • 44 (a)
    OneToMany
    Species with no ortholog for TRMT112P6:
    • A. gosspyii yeast (Ashbya gossypii)
    • Actinobacteria (Mycobacterium tuberculosis)
    • African clawed frog (Xenopus laevis)
    • African malaria mosquito (Anopheles gambiae)
    • Alicante grape (Vitis vinifera)
    • alpha proteobacteria (Wolbachia pipientis)
    • amoeba (Dictyostelium discoideum)
    • Archea (Pyrococcus horikoshii)
    • barley (Hordeum vulgare)
    • beta proteobacteria (Neisseria meningitidis)
    • bread mold (Neurospora crassa)
    • chicken (Gallus gallus)
    • Chromalveolata (Phytophthora infestans)
    • common water flea (Daphnia pulex)
    • corn (Zea mays)
    • E. coli (Escherichia coli)
    • filamentous fungi (Aspergillus nidulans)
    • Firmicute bacteria (Streptococcus pneumoniae)
    • fission yeast (Schizosaccharomyces pombe)
    • green algae (Chlamydomonas reinhardtii)
    • honey bee (Apis mellifera)
    • K. lactis yeast (Kluyveromyces lactis)
    • loblloly pine (Pinus taeda)
    • malaria parasite (Plasmodium falciparum)
    • medicago trunc (Medicago Truncatula)
    • moss (Physcomitrella patens)
    • oppossum (Monodelphis domestica)
    • orangutan (Pongo pygmaeus)
    • pig (Sus scrofa)
    • platypus (Ornithorhynchus anatinus)
    • rainbow trout (Oncorhynchus mykiss)
    • rat (Rattus norvegicus)
    • rice (Oryza sativa)
    • rice blast fungus (Magnaporthe grisea)
    • schistosome parasite (Schistosoma mansoni)
    • sea anemone (Nematostella vectensis)
    • sea urchin (Strongylocentrotus purpuratus)
    • sorghum (Sorghum bicolor)
    • soybean (Glycine max)
    • stem rust fungus (Puccinia graminis)
    • sugarcane (Saccharum officinarum)
    • thale cress (Arabidopsis thaliana)
    • tomato (Lycopersicon esculentum)
    • toxoplasmosis (Toxoplasma gondii)
    • Trichoplax (Trichoplax adhaerens)
    • tropical clawed frog (Silurana tropicalis)
    • wheat (Triticum aestivum)

    Evolution for TRMT112P6 Gene

    ENSEMBL:
    Gene Tree for TRMT112P6 (if available)
    TreeFam:
    Gene Tree for TRMT112P6 (if available)

    Paralogs for TRMT112P6 Gene

    Paralogs for TRMT112P6 Gene

    genes like me logo Genes that share paralogs with TRMT112P6: view

    Variants for TRMT112P6 Gene

    Relevant External Links for TRMT112P6 Gene

    HapMap Linkage Disequilibrium report
    TRMT112P6

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for TRMT112P6 Gene

    Disorders for TRMT112P6 Gene

    No disorders were found for TRMT112P6 Gene.

    No data available for UniProtKB/Swiss-Prot for TRMT112P6 Gene

    Publications for TRMT112P6 Gene

    No publications were found for TRMT112P6 Gene.

    Products for TRMT112P6 Gene

    Sources for TRMT112P6 Gene

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