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Aliases for TRMT10B Gene

Aliases for TRMT10B Gene

  • TRNA Methyltransferase 10 Homolog B (S. Cerevisiae) 2 3
  • RNA (Guanine-9-)-Methyltransferase Domain-Containing Protein 3 3 4
  • RNA (Guanine-9-) Methyltransferase Domain Containing 3 2 3
  • RG9MTD3 3 4
  • TRNA Methyltransferase 10 Homolog B 3
  • EC 2.1.1.- 4
  • BA3J10.9 3

External Ids for TRMT10B Gene

Previous HGNC Symbols for TRMT10B Gene

  • RG9MTD3

Previous GeneCards Identifiers for TRMT10B Gene

  • GC09P037754
  • GC09P037755
  • GC09P037756
  • GC09P037757

Summaries for TRMT10B Gene

GeneCards Summary for TRMT10B Gene

TRMT10B (TRNA Methyltransferase 10 Homolog B (S. Cerevisiae)) is a Protein Coding gene. GO annotations related to this gene include methyltransferase activity. An important paralog of this gene is TRMT10C.

UniProtKB/Swiss-Prot for TRMT10B Gene

  • Probable RNA methyltransferase.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRMT10B Gene

Genomics for TRMT10B Gene

Genomic Location for TRMT10B Gene

37,753,800 bp from pter
37,778,972 bp from pter
25,173 bases
Plus strand

Genomic View for TRMT10B Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TRMT10B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRMT10B Gene

No data available for Regulatory Elements for TRMT10B Gene

Proteins for TRMT10B Gene

  • Protein details for TRMT10B Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    tRNA methyltransferase 10 homolog B
    Protein Accession:
    Secondary Accessions:
    • B7Z216
    • B7Z3D3
    • Q05DJ4
    • Q5QP83
    • Q8NAG2
    • Q96N36

    Protein attributes for TRMT10B Gene

    316 amino acids
    Molecular mass:
    36124 Da
    Quaternary structure:
    No Data Available
    • Sequence=BAB71074.1; Type=Erroneous termination; Positions=317; Note=Translated as stop.; Evidence={ECO:0000305};

    Alternative splice isoforms for TRMT10B Gene


neXtProt entry for TRMT10B Gene

Proteomics data for TRMT10B Gene at MOPED

Post-translational modifications for TRMT10B Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Antibody Products

No data available for DME Specific Peptides for TRMT10B Gene

Domains for TRMT10B Gene

Protein Domains for TRMT10B Gene

Graphical View of Domain Structure for InterPro Entry



  • Q6PF06
  • Contains 1 SAM-dependent MTase TRM10-type domain.
  • Belongs to the class IV-like SAM-binding methyltransferase superfamily. TRM10 family.
genes like me logo Genes that share domains with TRMT10B: view

No data available for Gene Families and Suggested Antigen Peptide Sequences for TRMT10B Gene

Function for TRMT10B Gene

Molecular function for TRMT10B Gene

UniProtKB/Swiss-Prot Function:
Probable RNA methyltransferase.

Enzyme Numbers (IUBMB) for TRMT10B Gene

Gene Ontology (GO) - Molecular Function for TRMT10B Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0008168 methyltransferase activity IEA --
genes like me logo Genes that share ontologies with TRMT10B: view

Animal Model Products

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for TRMT10B

In Situ Assay Products

Flow Cytometry Products

No data available for Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for TRMT10B Gene

Localization for TRMT10B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRMT10B Gene

Pathways for TRMT10B Gene

SuperPathways for TRMT10B Gene

No Data Available

Interacting Proteins for TRMT10B Gene

Gene Ontology (GO) - Biological Process for TRMT10B Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0032259 methylation IEA --
genes like me logo Genes that share ontologies with TRMT10B: view

No data available for Pathways by source for TRMT10B Gene

Transcripts for TRMT10B Gene

Unigene Clusters for TRMT10B Gene

TRNA methyltransferase 10 homolog B (S. cerevisiae):
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for TRMT10B

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRMT10B Gene

ExUns: 1 ^ 2 ^ 3a · 3b ^ 4a · 4b ^ 5a · 5b · 5c ^ 6a · 6b · 6c ^ 7 ^ 8 ^ 9 ^ 10
SP1: -
SP2: - - - - - - - -
SP3: - - - -
SP4: - - - -
SP5: - -
SP6: - - -
SP7: - -
SP8: -

Relevant External Links for TRMT10B Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for TRMT10B Gene

mRNA expression in normal human tissues for TRMT10B Gene

SOURCE GeneReport for Unigene cluster for TRMT10B Gene Hs.655614

genes like me logo Genes that share expressions with TRMT10B: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for TRMT10B Gene

Orthologs for TRMT10B Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for TRMT10B Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia TRMT10B 35
  • 88.71 (n)
  • 85.76 (a)
TRMT10B 36
  • 74 (a)
(Canis familiaris)
Mammalia TRMT10B 35
  • 90.51 (n)
  • 87.34 (a)
TRMT10B 36
  • 87 (a)
(Mus musculus)
Mammalia Trmt10b 35
  • 82.33 (n)
  • 78.41 (a)
Trmt10b 16
Trmt10b 36
  • 77 (a)
(Pan troglodytes)
Mammalia TRMT10B 35
  • 99.89 (n)
  • 99.68 (a)
RG9MTD3 36
  • 100 (a)
(Rattus norvegicus)
Mammalia Trmt10b 35
  • 81.1 (n)
  • 78.03 (a)
(Monodelphis domestica)
Mammalia TRMT10B 36
  • 66 (a)
(Ornithorhynchus anatinus)
Mammalia TRMT10B 36
  • 62 (a)
(Gallus gallus)
Aves LOC768672 35
  • 61.36 (n)
  • 59.47 (a)
TRMT10B 36
  • 56 (a)
(Anolis carolinensis)
Reptilia TRMT10B 36
  • 57 (a)
tropical clawed frog
(Silurana tropicalis)
Amphibia LOC100493764 35
  • 68.12 (n)
  • 69.93 (a)
Str.616 35
(Danio rerio)
Actinopterygii trmt10b 35
  • 60.47 (n)
  • 58.1 (a)
trmt10b 36
  • 50 (a)
(Caenorhabditis elegans)
Secernentea F25H8.1 36
  • 24 (a)
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes TRM10 36
  • 20 (a)
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 45 (a)
Species with no ortholog for TRMT10B:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for TRMT10B Gene

Gene Tree for TRMT10B (if available)
Gene Tree for TRMT10B (if available)

Paralogs for TRMT10B Gene

Paralogs for TRMT10B Gene Pseudogenes for TRMT10B Gene

genes like me logo Genes that share paralogs with TRMT10B: view

Variants for TRMT10B Gene

Sequence variations from dbSNP and Humsavar for TRMT10B Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type MAF
rs9858 -- 37,774,679(-) AGGAT(A/T)AAACT intron-variant
rs725687 -- 37,755,887(+) GTTTA(A/G)GTAAA intron-variant
rs764224 -- 37,760,995(+) CACTT(C/T)TGAGG intron-variant
rs764225 -- 37,760,691(+) CACTA(G/T)AGGTG intron-variant
rs764226 -- 37,760,648(+) TAATT(A/C)CCAAA intron-variant

Relevant External Links for TRMT10B Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for TRMT10B Gene

Disorders for TRMT10B Gene

No disorders were found for TRMT10B Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for TRMT10B Gene

Publications for TRMT10B Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 2 3 4
  2. hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes. (PMID: 17207965) Lamesch P. … Vidal M. (Genomics 2007) 3
  3. Toward an understanding of the protein interaction network of the human liver. (PMID: 21988832) Wang J. … Yang X. (Mol. Syst. Biol. 2011) 3
  4. DNA sequence and analysis of human chromosome 9. (PMID: 15164053) Humphray S.J. … Dunham I. (Nature 2004) 4
  5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4

Products for TRMT10B Gene

Sources for TRMT10B Gene

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