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Aliases for TRM-CAT3-2 Gene

Subcategory (RNA class) for TRM-CAT3-2 Gene

tRNA

Quality Score for this RNA gene is

2

Aliases for TRM-CAT3-2 Gene

  • Transfer RNA-Met (CAT) 3-2 2 3
  • Transfer RNA Methionine 8 (Anticodon CAU) 2 3
  • TRNA-Met-CAT-3-2 3
  • TRNAM8 3

External Ids for TRM-CAT3-2 Gene

ORGUL Members for TRM-CAT3-2 Gene

Previous HGNC Symbols for TRM-CAT3-2 Gene

  • TRNAM8

Summaries for TRM-CAT3-2 Gene

GeneCards Summary for TRM-CAT3-2 Gene

TRM-CAT3-2 (Transfer RNA-Met (CAT) 3-2) is an RNA Gene, and is affiliated with the tRNA class.

Additional gene information for TRM-CAT3-2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRM-CAT3-2 Gene

Genomics for TRM-CAT3-2 Gene

Regulatory Elements for TRM-CAT3-2 Gene

Enhancers for TRM-CAT3-2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06H028952 1.6 Ensembl ENCODE dbSUPER 0.7 -0.3 -301 1 PKNOX1 FOXA2 ARNT ARID4B SIN3A ZNF2 YY1 ZNF766 FOS SP3 ZKSCAN8 TRIM27 ZSCAN12 ZKSCAN3 ZSCAN23 HCG15 ENSG00000244349 ZKSCAN4 HCG14 SUMO2P1
GH06H028950 1.3 Ensembl ENCODE 0.7 +2.2 2153 0 MLX ARNT ARID4B SIN3A ZNF2 GTF3C2 ZNF143 FOS ATF7 DEK TRIM27 ZKSCAN8 ZSCAN12 ZKSCAN3 ZSCAN23 ENSG00000244349 HCG15 ZKSCAN4 HCG14 SUMO2P1
GH06H028954 0.9 dbSUPER 0.7 -2.7 -2655 2 HDGF TBP ATF1 NFRKB CHAMP1 POLR3A ATF7 SMARCA5 ZBTB2 ZEB2 TRIM27 ZFP57 HCG15 ENSG00000244349 HCG14 SUMO2P1 GABBR1 ERVK9-12 HLA-U LINC01556
GH06H028960 1 dbSUPER 0.4 -7.6 -7612 1 HDGF PKNOX1 ATF1 ARNT TCF12 ZNF766 ATF7 NCOA1 REST ZNF592 TRIM27 ZFP57 ERVK9-12 LINC01556 ZNF602P TRM-CAT3-2 KRT18P1
GH06H028953 0.5 ENCODE dbSUPER 0.7 +0.9 856 0 TRIM27 HCG15 ENSG00000244349 HCG14 TRK-TTT3-3 TRM-CAT3-2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRM-CAT3-2 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRM-CAT3-2 Gene

Chromosome:
6
Start:
28,953,265 bp from pter
End:
28,953,337 bp from pter
Size:
73 bases
Orientation:
Minus strand

Genomic View for TRM-CAT3-2 Gene

Genes around TRM-CAT3-2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRM-CAT3-2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRM-CAT3-2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for TRM-CAT3-2 Gene

Post-translational modifications for TRM-CAT3-2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRM-CAT3-2 Gene

Domains & Families for TRM-CAT3-2 Gene

Gene Families for TRM-CAT3-2 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRM-CAT3-2: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRM-CAT3-2 Gene

Function for TRM-CAT3-2 Gene

Phenotypes From GWAS Catalog for TRM-CAT3-2 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TRM-CAT3-2
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRM-CAT3-2 Gene

Localization for TRM-CAT3-2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRM-CAT3-2 Gene

Pathways & Interactions for TRM-CAT3-2 Gene

SuperPathways for TRM-CAT3-2 Gene

No Data Available

Interacting Proteins for TRM-CAT3-2 Gene

Gene Ontology (GO) - Biological Process for TRM-CAT3-2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRM-CAT3-2 Gene

Drugs & Compounds for TRM-CAT3-2 Gene

No Compound Related Data Available

Transcripts for TRM-CAT3-2 Gene

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TRM-CAT3-2
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for TRM-CAT3-2 Gene

No ASD Table

Relevant External Links for TRM-CAT3-2 Gene

GeneLoc Exon Structure for
TRM-CAT3-2
ECgene alternative splicing isoforms for
TRM-CAT3-2

No data available for mRNA/cDNA for TRM-CAT3-2 Gene

Expression for TRM-CAT3-2 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRM-CAT3-2 Gene

Orthologs for TRM-CAT3-2 Gene

No data available for Orthologs and Evolution for TRM-CAT3-2 Gene

Paralogs for TRM-CAT3-2 Gene

No data available for Paralogs for TRM-CAT3-2 Gene

Variants for TRM-CAT3-2 Gene

Relevant External Links for TRM-CAT3-2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRM-CAT3-2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRM-CAT3-2 Gene

Disorders for TRM-CAT3-2 Gene

No disorders were found for TRM-CAT3-2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRM-CAT3-2 Gene

Publications for TRM-CAT3-2 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 60

Products for TRM-CAT3-2 Gene

Sources for TRM-CAT3-2 Gene

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