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Aliases for TRL-TAG3-1 Gene

Subcategory (RNA class) for TRL-TAG3-1 Gene

tRNA

Quality Score for this RNA gene is

2

Aliases for TRL-TAG3-1 Gene

  • Transfer RNA-Leu (TAG) 3-1 2 3
  • Transfer RNA Leucine 7 (Anticodon UAG) 2 3
  • TRNA-Leu-TAG-3-1 3
  • TRNAL7 3

External Ids for TRL-TAG3-1 Gene

ORGUL Members for TRL-TAG3-1 Gene

Previous HGNC Symbols for TRL-TAG3-1 Gene

  • TRNAL7

Summaries for TRL-TAG3-1 Gene

GeneCards Summary for TRL-TAG3-1 Gene

TRL-TAG3-1 (Transfer RNA-Leu (TAG) 3-1) is an RNA Gene, and is affiliated with the tRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRL-TAG3-1 Gene

Genomics for TRL-TAG3-1 Gene

Regulatory Elements for TRL-TAG3-1 Gene

Enhancers for TRL-TAG3-1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16G022187 2.1 FANTOM5 Ensembl ENCODE dbSUPER 0.7 +4.9 4922 6.5 CREB3L1 MLX ZFP64 DMAP1 YY1 SLC30A9 ZNF416 ZNF143 SP3 NFYC POLR3E MFSD13B PDZD9 UQCRC2 NPIPB5 ENSG00000260973 ENSG00000260306 CDR2 SMG1P1 TRL-TAG3-1
GH16G022194 2 FANTOM5 Ensembl ENCODE dbSUPER 0.7 +0.1 93 2.2 CREB3L1 MLX ZFP64 DMAP1 YBX1 FEZF1 YY1 SLC30A9 ZNF143 SP3 SMG1P1 SMG1P4 ENSG00000260635 C16orf52 NPIPB5 MFSD13B ENSG00000260306 PDZD9 TRL-TAG3-1 GC16M022196
GH16G022198 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.7 -3.8 -3833 2.0 TBP CBX3 MLX KLF17 RAD21 DNMT3B THRB CHAMP1 ZNF121 CBX5 ENSG00000260306 TRL-TAG3-1 GC16M022196 EEF2K
GH16G022201 1.1 ENCODE dbSUPER 0.4 -6.1 -6102 1.3 BMI1 ZNF2 ZBTB40 ZNF366 SCRT2 ZNF416 ZNF362 YY2 USF2 ZEB2 MFSD13B EEF2K TRL-TAG3-1 GC16M022196
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRL-TAG3-1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRL-TAG3-1 Gene

Chromosome:
16
Start:
22,195,711 bp from pter
End:
22,195,792 bp from pter
Size:
82 bases
Orientation:
Minus strand

Genomic View for TRL-TAG3-1 Gene

Genes around TRL-TAG3-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRL-TAG3-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRL-TAG3-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRL-TAG3-1 Gene

Proteins for TRL-TAG3-1 Gene

Post-translational modifications for TRL-TAG3-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRL-TAG3-1 Gene

Domains & Families for TRL-TAG3-1 Gene

Gene Families for TRL-TAG3-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRL-TAG3-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRL-TAG3-1 Gene

Function for TRL-TAG3-1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRL-TAG3-1 Gene

Localization for TRL-TAG3-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRL-TAG3-1 Gene

Pathways & Interactions for TRL-TAG3-1 Gene

SuperPathways for TRL-TAG3-1 Gene

No Data Available

Interacting Proteins for TRL-TAG3-1 Gene

Gene Ontology (GO) - Biological Process for TRL-TAG3-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRL-TAG3-1 Gene

Drugs & Compounds for TRL-TAG3-1 Gene

No Compound Related Data Available

Transcripts for TRL-TAG3-1 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRL-TAG3-1 Gene

No ASD Table

Relevant External Links for TRL-TAG3-1 Gene

GeneLoc Exon Structure for
TRL-TAG3-1
ECgene alternative splicing isoforms for
TRL-TAG3-1

No data available for mRNA/cDNA for TRL-TAG3-1 Gene

Expression for TRL-TAG3-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRL-TAG3-1 Gene

Orthologs for TRL-TAG3-1 Gene

No data available for Orthologs and Evolution for TRL-TAG3-1 Gene

Paralogs for TRL-TAG3-1 Gene

No data available for Paralogs for TRL-TAG3-1 Gene

Variants for TRL-TAG3-1 Gene

Relevant External Links for TRL-TAG3-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRL-TAG3-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRL-TAG3-1 Gene

Disorders for TRL-TAG3-1 Gene

No disorders were found for TRL-TAG3-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRL-TAG3-1 Gene

Publications for TRL-TAG3-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan P.P. … Lowe T.M. (Nucleic Acids Res. 2009) 3 64

Products for TRL-TAG3-1 Gene

Sources for TRL-TAG3-1 Gene

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