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Aliases for TRL-TAA1-1 Gene

Subcategory (RNA class) for TRL-TAA1-1 Gene

tRNA

Quality Score for this RNA gene is

2

Aliases for TRL-TAA1-1 Gene

  • Transfer RNA-Leu (TAA) 1-1 2 3
  • Transfer RNA Leucine 29 (Anticodon UAA) 2 3
  • TRNA-Leu-TAA-1-1 3
  • TRNAL29 3

External Ids for TRL-TAA1-1 Gene

ORGUL Members for TRL-TAA1-1 Gene

Previous HGNC Symbols for TRL-TAA1-1 Gene

  • TRNAL29

Summaries for TRL-TAA1-1 Gene

GeneCards Summary for TRL-TAA1-1 Gene

TRL-TAA1-1 (Transfer RNA-Leu (TAA) 1-1) is an RNA Gene, and is affiliated with the tRNA class.

Additional gene information for TRL-TAA1-1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRL-TAA1-1 Gene

Genomics for TRL-TAA1-1 Gene

GeneHancer (GH) Regulatory Elements for TRL-TAA1-1 Gene

Promoters and enhancers for TRL-TAA1-1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I144214 Enhancer 1.3 Ensembl ENCODE 550.8 -0.3 -252 3 MLX ZFP64 FEZF1 DMAP1 IRF4 YY1 ZNF213 ZNF143 SP3 ZNF610 GC06P144217 TRL-TAA1-1 ADAT2 ENSG00000270890 VDAC1P8 LTV1 SF3B5 TPT1P4
GH06I144219 Enhancer 0.6 ENCODE 0.8 +2.8 2752 0.2 SMARCA5 CTCF ZNF654 REST ZNF2 RAD21 GTF3C2 SMC3 ZNF143 TRL-TAA1-1 ENSG00000216475
GH06I144248 Enhancer 0.7 Ensembl ENCODE 0.3 +32.6 32569 2.1 IKZF1 NFATC1 VEZF1 JUNB BATF RUNX3 STX11 ENSG00000225311 ENSG00000216475 TRL-TAA1-1
GH06I144233 Enhancer 0.5 ENCODE 0.4 +18.2 18172 1.6 MITF USF1 POU5F1 ZNF143 BACH1 USF2 TRL-TAA1-1 ENSG00000216475
GH06I144231 Enhancer 0.2 ENCODE 0.4 +15.2 15247 0.1 TRL-TAA1-1 ENSG00000216475
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TRL-TAA1-1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRL-TAA1-1 Gene

Genomic Locations for TRL-TAA1-1 Gene
chr6:144,216,547-144,216,629
(GRCh38/hg38)
Size:
83 bases
Orientation:
Plus strand
chr6:144,537,684-144,537,766
(GRCh37/hg19)

Genomic View for TRL-TAA1-1 Gene

Genes around TRL-TAA1-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRL-TAA1-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRL-TAA1-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRL-TAA1-1 Gene

Proteins for TRL-TAA1-1 Gene

Post-translational modifications for TRL-TAA1-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRL-TAA1-1 Gene

Domains & Families for TRL-TAA1-1 Gene

Gene Families for TRL-TAA1-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRL-TAA1-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRL-TAA1-1 Gene

Function for TRL-TAA1-1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRL-TAA1-1 Gene

Localization for TRL-TAA1-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRL-TAA1-1 Gene

Pathways & Interactions for TRL-TAA1-1 Gene

SuperPathways for TRL-TAA1-1 Gene

No Data Available

Interacting Proteins for TRL-TAA1-1 Gene

Gene Ontology (GO) - Biological Process for TRL-TAA1-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRL-TAA1-1 Gene

Drugs & Compounds for TRL-TAA1-1 Gene

No Compound Related Data Available

Transcripts for TRL-TAA1-1 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRL-TAA1-1 Gene

No ASD Table

Relevant External Links for TRL-TAA1-1 Gene

GeneLoc Exon Structure for
TRL-TAA1-1
ECgene alternative splicing isoforms for
TRL-TAA1-1

No data available for mRNA/cDNA for TRL-TAA1-1 Gene

Expression for TRL-TAA1-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRL-TAA1-1 Gene

Orthologs for TRL-TAA1-1 Gene

No data available for Orthologs and Evolution for TRL-TAA1-1 Gene

Paralogs for TRL-TAA1-1 Gene

No data available for Paralogs for TRL-TAA1-1 Gene

Variants for TRL-TAA1-1 Gene

Additional Variant Information for TRL-TAA1-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRL-TAA1-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRL-TAA1-1 Gene

Disorders for TRL-TAA1-1 Gene

No disorders were found for TRL-TAA1-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRL-TAA1-1 Gene

Publications for TRL-TAA1-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 58

Products for TRL-TAA1-1 Gene

Sources for TRL-TAA1-1 Gene

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