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Aliases for TRL-AAG3-1 Gene

Subcategory (RNA class) for TRL-AAG3-1 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for TRL-AAG3-1 Gene

  • Transfer RNA-Leu (AAG) 3-1 2 3
  • Transfer RNA Leucine 17 (Anticodon AAG) 2 3
  • TRNA-Leu-AAG-3-1 3
  • TRNAL17 3

External Ids for TRL-AAG3-1 Gene

Previous HGNC Symbols for TRL-AAG3-1 Gene

  • TRNAL17

Summaries for TRL-AAG3-1 Gene

GeneCards Summary for TRL-AAG3-1 Gene

TRL-AAG3-1 (Transfer RNA-Leu (AAG) 3-1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRL-AAG3-1 Gene

Genomics for TRL-AAG3-1 Gene

Regulatory Elements for TRL-AAG3-1 Gene

Enhancers for TRL-AAG3-1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06G028988 1.5 Ensembl ENCODE dbSUPER 0.7 -0.3 -335 1.1 PKNOX1 ATF1 GTF3C2 REST ZNF592 MEF2D CREB3 SMARCA4 HMBOX1 NR2C1 TRIM27 ZKSCAN3 ZKSCAN4 ZKSCAN8 ZSCAN31 HCG4P7 HCG4 MICD MICE TRL-AAG3-1
GH06G028992 1 dbSUPER 0.7 +3.9 3933 1.1 HDGF ATF1 PKNOX1 CREB3L1 ARNT TCF12 ZNF766 GATA2 NCOA1 REST TRIM27 TRL-AAG3-1 ZNF311
GH06G028995 0.9 dbSUPER 0.4 +7.8 7767 1.8 HDAC1 HDGF TBL1XR1 TCF12 GATA2 ZBTB2 JUNB NCOA1 ZEB2 SMARCA4 TRIM27 HCG4P7 ZKSCAN8 ZNF311 TRL-AAG3-1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRL-AAG3-1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRL-AAG3-1 Gene

Chromosome:
6
Start:
28,989,002 bp from pter
End:
28,989,083 bp from pter
Size:
82 bases
Orientation:
Plus strand

Genomic View for TRL-AAG3-1 Gene

Genes around TRL-AAG3-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRL-AAG3-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRL-AAG3-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for TRL-AAG3-1 Gene

Post-translational modifications for TRL-AAG3-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRL-AAG3-1 Gene

Domains & Families for TRL-AAG3-1 Gene

Gene Families for TRL-AAG3-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRL-AAG3-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRL-AAG3-1 Gene

Function for TRL-AAG3-1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRL-AAG3-1 Gene

Localization for TRL-AAG3-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRL-AAG3-1 Gene

Pathways & Interactions for TRL-AAG3-1 Gene

SuperPathways for TRL-AAG3-1 Gene

No Data Available

Interacting Proteins for TRL-AAG3-1 Gene

Gene Ontology (GO) - Biological Process for TRL-AAG3-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRL-AAG3-1 Gene

Drugs & Compounds for TRL-AAG3-1 Gene

No Compound Related Data Available

Transcripts for TRL-AAG3-1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for TRL-AAG3-1 Gene

No ASD Table

Relevant External Links for TRL-AAG3-1 Gene

GeneLoc Exon Structure for
TRL-AAG3-1
ECgene alternative splicing isoforms for
TRL-AAG3-1

No data available for mRNA/cDNA for TRL-AAG3-1 Gene

Expression for TRL-AAG3-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRL-AAG3-1 Gene

Orthologs for TRL-AAG3-1 Gene

No data available for Orthologs and Evolution for TRL-AAG3-1 Gene

Paralogs for TRL-AAG3-1 Gene

No data available for Paralogs for TRL-AAG3-1 Gene

Variants for TRL-AAG3-1 Gene

Relevant External Links for TRL-AAG3-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRL-AAG3-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRL-AAG3-1 Gene

Disorders for TRL-AAG3-1 Gene

No disorders were found for TRL-AAG3-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRL-AAG3-1 Gene

Publications for TRL-AAG3-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan P.P. … Lowe T.M. (Nucleic Acids Res. 2009) 3 64

Products for TRL-AAG3-1 Gene

Sources for TRL-AAG3-1 Gene

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