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Aliases for TRL-AAG2-1 Gene

Subcategory (RNA class) for TRL-AAG2-1 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for TRL-AAG2-1 Gene

  • Transfer RNA-Leu (AAG) 2-1 2 3
  • Transfer RNA Leucine 32 (Anticodon AAG) 2 3
  • Transfer RNA-Leu (AAG) 2-3 2 3
  • TRNA-Leu-AAG-2-3 3
  • TRL-AAG2-3 3
  • TRNAL32 3

External Ids for TRL-AAG2-1 Gene

Previous HGNC Symbols for TRL-AAG2-1 Gene

  • TRNAL32
  • TRL-AAG2-3

Previous GeneCards Identifiers for TRL-AAG2-1 Gene

  • GC14P020610

Summaries for TRL-AAG2-1 Gene

GeneCards Summary for TRL-AAG2-1 Gene

TRL-AAG2-1 (Transfer RNA-Leu (AAG) 2-1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for TRL-AAG2-1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRL-AAG2-1 Gene

Genomics for TRL-AAG2-1 Gene

Regulatory Elements for TRL-AAG2-1 Gene

Enhancers for TRL-AAG2-1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05H181183 2 FANTOM5 Ensembl ENCODE dbSUPER 0.7 -3.4 -3436 2 HDGF ARNT ARID4B SIN3A DMAP1 ZNF2 ZNF766 CBX5 ZNF143 ZNF207 ENSG00000233937 RACK1 ENSG00000248514 CNOT6 ZFP62 TRIM7 TRIM52 SNORD96A MGAT1 TRL-AAG2-1
GH05H181184 0.9 ENCODE 0.4 -5.6 -5566 0 ELF3 HDGF RB1 ARID4B RAD21 ZNF143 ATF7 RUNX3 IKZF2 MIXL1 ENSG00000248514 TRIM7 TRIM41 ENSG00000247049 GC05P181179 TRL-AAG2-1
GH05H181182 0.5 ENCODE 0.4 -5.1 -5105 0 E2F1 CTCF MLLT1 KDM1A ZXDB ENSG00000248514 TRIM7 TRIM41 ENSG00000247049 GC05P181179 TRL-AAG2-1
GH05H181179 0.5 dbSUPER 0.4 -7.9 -7873 1 IKZF1 ZNF24 ZNF2 IKZF2 TRIM7 TRIM41 ENSG00000247049 ENSG00000248514 RACK1 ENSG00000233937 MGAT1 ENSG00000248103 GC05P181179 TRL-AAG2-1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRL-AAG2-1 on UCSC Golden Path with GeneCards custom track

Promoters for TRL-AAG2-1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000191732 1999 5401 MLX FEZF1 DMAP1 YY1 ZNF143 SP3 ZC3H11A SSRP1 GLIS1 RCOR2

Genomic Location for TRL-AAG2-1 Gene

Chromosome:
5
Start:
181,187,701 bp from pter
End:
181,187,782 bp from pter
Size:
82 bases
Orientation:
Plus strand

Genomic View for TRL-AAG2-1 Gene

Genes around TRL-AAG2-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRL-AAG2-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRL-AAG2-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRL-AAG2-1 Gene

Proteins for TRL-AAG2-1 Gene

Post-translational modifications for TRL-AAG2-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRL-AAG2-1 Gene

Domains & Families for TRL-AAG2-1 Gene

Gene Families for TRL-AAG2-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRL-AAG2-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRL-AAG2-1 Gene

Function for TRL-AAG2-1 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TRL-AAG2-1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRL-AAG2-1 Gene

Localization for TRL-AAG2-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRL-AAG2-1 Gene

Pathways & Interactions for TRL-AAG2-1 Gene

SuperPathways for TRL-AAG2-1 Gene

No Data Available

Interacting Proteins for TRL-AAG2-1 Gene

Gene Ontology (GO) - Biological Process for TRL-AAG2-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRL-AAG2-1 Gene

Drugs & Compounds for TRL-AAG2-1 Gene

No Compound Related Data Available

Transcripts for TRL-AAG2-1 Gene

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TRL-AAG2-1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for TRL-AAG2-1 Gene

No ASD Table

Relevant External Links for TRL-AAG2-1 Gene

GeneLoc Exon Structure for
TRL-AAG2-1
ECgene alternative splicing isoforms for
TRL-AAG2-1

No data available for mRNA/cDNA for TRL-AAG2-1 Gene

Expression for TRL-AAG2-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRL-AAG2-1 Gene

Orthologs for TRL-AAG2-1 Gene

No data available for Orthologs and Evolution for TRL-AAG2-1 Gene

Paralogs for TRL-AAG2-1 Gene

No data available for Paralogs for TRL-AAG2-1 Gene

Variants for TRL-AAG2-1 Gene

Relevant External Links for TRL-AAG2-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRL-AAG2-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRL-AAG2-1 Gene

Disorders for TRL-AAG2-1 Gene

No disorders were found for TRL-AAG2-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRL-AAG2-1 Gene

Publications for TRL-AAG2-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 60

Products for TRL-AAG2-1 Gene

Sources for TRL-AAG2-1 Gene

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