Free for academic non-profit institutions. Other users need a Commercial license

Aliases for TRK-TTT3-1 Gene

Subcategory (RNA class) for TRK-TTT3-1 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for TRK-TTT3-1 Gene

  • Transfer RNA-Lys (TTT) 3-1 2 3
  • Transfer RNA Lysine 16 (Anticodon UUU) 2 3
  • TRNA-Lys-TTT-3-1 3
  • TRNAK16 3

External Ids for TRK-TTT3-1 Gene

Previous HGNC Symbols for TRK-TTT3-1 Gene

  • TRNAK16

Summaries for TRK-TTT3-1 Gene

GeneCards Summary for TRK-TTT3-1 Gene

TRK-TTT3-1 (Transfer RNA-Lys (TTT) 3-1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for TRK-TTT3-1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRK-TTT3-1 Gene

Genomics for TRK-TTT3-1 Gene

GeneHancer (GH) Regulatory Elements for TRK-TTT3-1 Gene

Promoters and enhancers for TRK-TTT3-1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I204505 Enhancer 1.5 Ensembl ENCODE dbSUPER 550.8 +0.6 571 3.3 CLOCK MLX YBX1 DMAP1 YY1 ZNF213 E2F8 ZNF143 ZNF548 SP3 TRK-TTT3-1 TRK-TTT3-2 ZC3H11A MDM4 SNRPE ZBED6 RBBP5 PPP1R15B LRRN2 PIK3C2B
GH01I204502 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.8 -2.7 -2695 2.1 RAD21 POLR3A ARID2 ZNF143 KLF11 ZNF654 NCOA1 REST ZNF592 ARHGAP35 RBBP5 TRK-TTT3-1 PIK3C2B
GH01I204497 Enhancer 0.7 dbSUPER 0.4 -7.8 -7816 3 ZMYM3 CEBPG ATF7 TRIM24 EZH2 STAT1 RXRA HLF CEBPB ATF2 PPP1R15B LRRN2 PIK3C2B TRK-TTT3-1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TRK-TTT3-1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRK-TTT3-1 Gene

Genomic Locations for TRK-TTT3-1 Gene
chr1:204,506,527-204,506,599
(GRCh38/hg38)
Size:
73 bases
Orientation:
Plus strand
chr1:204,475,655-204,475,727
(GRCh37/hg19)

Genomic View for TRK-TTT3-1 Gene

Genes around TRK-TTT3-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRK-TTT3-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRK-TTT3-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRK-TTT3-1 Gene

Proteins for TRK-TTT3-1 Gene

Post-translational modifications for TRK-TTT3-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRK-TTT3-1 Gene

Domains & Families for TRK-TTT3-1 Gene

Gene Families for TRK-TTT3-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRK-TTT3-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRK-TTT3-1 Gene

Function for TRK-TTT3-1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRK-TTT3-1 Gene

Localization for TRK-TTT3-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRK-TTT3-1 Gene

Pathways & Interactions for TRK-TTT3-1 Gene

SuperPathways for TRK-TTT3-1 Gene

No Data Available

Interacting Proteins for TRK-TTT3-1 Gene

Gene Ontology (GO) - Biological Process for TRK-TTT3-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRK-TTT3-1 Gene

Drugs & Compounds for TRK-TTT3-1 Gene

No Compound Related Data Available

Transcripts for TRK-TTT3-1 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRK-TTT3-1 Gene

No ASD Table

Relevant External Links for TRK-TTT3-1 Gene

GeneLoc Exon Structure for
TRK-TTT3-1
ECgene alternative splicing isoforms for
TRK-TTT3-1

No data available for mRNA/cDNA for TRK-TTT3-1 Gene

Expression for TRK-TTT3-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRK-TTT3-1 Gene

Orthologs for TRK-TTT3-1 Gene

No data available for Orthologs and Evolution for TRK-TTT3-1 Gene

Paralogs for TRK-TTT3-1 Gene

No data available for Paralogs for TRK-TTT3-1 Gene

Variants for TRK-TTT3-1 Gene

Additional Variant Information for TRK-TTT3-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRK-TTT3-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRK-TTT3-1 Gene

Disorders for TRK-TTT3-1 Gene

No disorders were found for TRK-TTT3-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRK-TTT3-1 Gene

Publications for TRK-TTT3-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 58

Products for TRK-TTT3-1 Gene

Sources for TRK-TTT3-1 Gene

Content
Loading form....