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Aliases for TRK-TTT3-1 Gene

Subcategory (RNA class) for TRK-TTT3-1 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for TRK-TTT3-1 Gene

  • Transfer RNA-Lys (TTT) 3-1 2 3
  • Transfer RNA Lysine 16 (Anticodon UUU) 2 3
  • TRNA-Lys-TTT-3-1 3
  • TRNAK16 3

External Ids for TRK-TTT3-1 Gene

Previous HGNC Symbols for TRK-TTT3-1 Gene

  • TRNAK16

Summaries for TRK-TTT3-1 Gene

GeneCards Summary for TRK-TTT3-1 Gene

TRK-TTT3-1 (Transfer RNA-Lys (TTT) 3-1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRK-TTT3-1 Gene

Genomics for TRK-TTT3-1 Gene

Regulatory Elements for TRK-TTT3-1 Gene

Enhancers for TRK-TTT3-1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F204502 0.9 Ensembl ENCODE 0.8 -2.7 -2695 2.1 CTCF RAD21 ZNF316 POLR3A SCRT2 SMC3 NFE2 DNMT1 GATAD2A KLF11 RBBP5 TRK-TTT3-1 PIK3C2B
GH01F204498 0.6 Ensembl 0.4 -7.2 -7227 1.0 STAT1 ZMYM3 CEBPB CEBPG ZNF589 HMBOX1 BCL6 TRIM24 ZNF584 SPI1 PPP1R15B PIK3C2B TRK-TTT3-1
GH01F204496 0.2 Ensembl 0.4 -10.0 -10027 0.2 ZNF175 PYGO2 FOSL1 GATA2 NFE2 ZNF584 ZNF639 SMARCE1 ZNF197 ZNF362 RBBP5 MDM4 PIK3C2B TRK-TTT3-1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around TRK-TTT3-1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRK-TTT3-1 Gene

Chromosome:
1
Start:
204,506,527 bp from pter
End:
204,506,599 bp from pter
Size:
73 bases
Orientation:
Plus strand

Genomic View for TRK-TTT3-1 Gene

Genes around TRK-TTT3-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRK-TTT3-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRK-TTT3-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRK-TTT3-1 Gene

Proteins for TRK-TTT3-1 Gene

Post-translational modifications for TRK-TTT3-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRK-TTT3-1 Gene

Domains & Families for TRK-TTT3-1 Gene

Gene Families for TRK-TTT3-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRK-TTT3-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRK-TTT3-1 Gene

Function for TRK-TTT3-1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRK-TTT3-1 Gene

Localization for TRK-TTT3-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRK-TTT3-1 Gene

Pathways & Interactions for TRK-TTT3-1 Gene

SuperPathways for TRK-TTT3-1 Gene

No Data Available

Interacting Proteins for TRK-TTT3-1 Gene

Gene Ontology (GO) - Biological Process for TRK-TTT3-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRK-TTT3-1 Gene

Transcripts for TRK-TTT3-1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for TRK-TTT3-1 Gene

No ASD Table

Relevant External Links for TRK-TTT3-1 Gene

GeneLoc Exon Structure for
TRK-TTT3-1
ECgene alternative splicing isoforms for
TRK-TTT3-1

No data available for mRNA/cDNA for TRK-TTT3-1 Gene

Expression for TRK-TTT3-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TRK-TTT3-1 Gene

Orthologs for TRK-TTT3-1 Gene

No data available for Orthologs and Evolution for TRK-TTT3-1 Gene

Paralogs for TRK-TTT3-1 Gene

No data available for Paralogs for TRK-TTT3-1 Gene

Variants for TRK-TTT3-1 Gene

Relevant External Links for TRK-TTT3-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRK-TTT3-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRK-TTT3-1 Gene

Disorders for TRK-TTT3-1 Gene

No disorders were found for TRK-TTT3-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRK-TTT3-1 Gene

Publications for TRK-TTT3-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan P.P. … Lowe T.M. (Nucleic Acids Res. 2009) 3 64

Products for TRK-TTT3-1 Gene

Sources for TRK-TTT3-1 Gene

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