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Aliases for TRK-TTT3-1 Gene

Subcategory (RNA class) for TRK-TTT3-1 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for TRK-TTT3-1 Gene

  • Transfer RNA-Lys (TTT) 3-1 2 3
  • Transfer RNA Lysine 16 (Anticodon UUU) 2 3
  • TRNA-Lys-TTT-3-1 3
  • TRNAK16 3

External Ids for TRK-TTT3-1 Gene

Previous HGNC Symbols for TRK-TTT3-1 Gene

  • TRNAK16

Summaries for TRK-TTT3-1 Gene

GeneCards Summary for TRK-TTT3-1 Gene

TRK-TTT3-1 (Transfer RNA-Lys (TTT) 3-1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for TRK-TTT3-1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRK-TTT3-1 Gene

Genomics for TRK-TTT3-1 Gene

Regulatory Elements for TRK-TTT3-1 Gene

Enhancers for TRK-TTT3-1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H204505 1.7 Ensembl ENCODE dbSUPER 0.7 +0.6 571 3.3 MLX YBX1 DMAP1 YY1 ZNF143 ZNF548 SP3 NFYC ZFP41 SSRP1 ZC3H11A MDM4 SNRPE ZBED6 PPP1R15B RBBP5 LRRN2 PIK3C2B TRK-TTT3-2 TRK-TTT3-1
GH01H204502 1.3 Ensembl ENCODE dbSUPER 0.7 -2.7 -2695 2.1 CTCF GTF2E2 MAX RAD21 CC2D1A ZNF316 POLR3A SMC3 ZNF143 NFE2 RBBP5 TRK-TTT3-1 PIK3C2B
GH01H204497 0.7 dbSUPER 0.4 -7.8 -7816 3 STAT1 HLF CEBPB ZMYM3 CEBPG ATF2 ATF4 IKZF1 CEBPA BCL6B PPP1R15B LRRN2 PIK3C2B TRK-TTT3-1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRK-TTT3-1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRK-TTT3-1 Gene

Genomic Locations for TRK-TTT3-1 Gene
chr1:204,506,527-204,506,599
(GRCh38/hg38)
Size:
73 bases
Orientation:
Plus strand
chr1:204,475,655-204,475,727
(GRCh37/hg19)

Genomic View for TRK-TTT3-1 Gene

Genes around TRK-TTT3-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRK-TTT3-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRK-TTT3-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRK-TTT3-1 Gene

Proteins for TRK-TTT3-1 Gene

Post-translational modifications for TRK-TTT3-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRK-TTT3-1 Gene

Domains & Families for TRK-TTT3-1 Gene

Gene Families for TRK-TTT3-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRK-TTT3-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRK-TTT3-1 Gene

Function for TRK-TTT3-1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRK-TTT3-1 Gene

Localization for TRK-TTT3-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRK-TTT3-1 Gene

Pathways & Interactions for TRK-TTT3-1 Gene

SuperPathways for TRK-TTT3-1 Gene

No Data Available

Interacting Proteins for TRK-TTT3-1 Gene

Gene Ontology (GO) - Biological Process for TRK-TTT3-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRK-TTT3-1 Gene

Drugs & Compounds for TRK-TTT3-1 Gene

No Compound Related Data Available

Transcripts for TRK-TTT3-1 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRK-TTT3-1 Gene

No ASD Table

Relevant External Links for TRK-TTT3-1 Gene

GeneLoc Exon Structure for
TRK-TTT3-1
ECgene alternative splicing isoforms for
TRK-TTT3-1

No data available for mRNA/cDNA for TRK-TTT3-1 Gene

Expression for TRK-TTT3-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRK-TTT3-1 Gene

Orthologs for TRK-TTT3-1 Gene

No data available for Orthologs and Evolution for TRK-TTT3-1 Gene

Paralogs for TRK-TTT3-1 Gene

No data available for Paralogs for TRK-TTT3-1 Gene

Variants for TRK-TTT3-1 Gene

Relevant External Links for TRK-TTT3-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRK-TTT3-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRK-TTT3-1 Gene

Disorders for TRK-TTT3-1 Gene

No disorders were found for TRK-TTT3-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRK-TTT3-1 Gene

Publications for TRK-TTT3-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 60

Products for TRK-TTT3-1 Gene

Sources for TRK-TTT3-1 Gene

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