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Aliases for TRK-TTT10-1 Gene

Subcategory (RNA class) for TRK-TTT10-1 Gene

tRNA

Quality Score for this RNA gene is

2

Aliases for TRK-TTT10-1 Gene

  • Transfer RNA-Lys (TTT) 10-1 2 3
  • Transfer RNA Lysine 38 (Anticodon UUU) Pseudogene 2 3
  • TRNA-Lys-TTT-10-1 3
  • TRNAK38P 3

External Ids for TRK-TTT10-1 Gene

ORGUL Members for TRK-TTT10-1 Gene

Previous HGNC Symbols for TRK-TTT10-1 Gene

  • TRNAK38P

Summaries for TRK-TTT10-1 Gene

GeneCards Summary for TRK-TTT10-1 Gene

TRK-TTT10-1 (Transfer RNA-Lys (TTT) 10-1) is an RNA Gene, and is affiliated with the tRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRK-TTT10-1 Gene

Genomics for TRK-TTT10-1 Gene

Regulatory Elements for TRK-TTT10-1 Gene

Enhancers for TRK-TTT10-1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19F041233 0.2 Ensembl 0.4 +8.5 8461 0.9 BCOR SMARCA5 ZMYM3 NFXL1 SREBF1 CTBP1 IKZF1 ADNP KDM1A SPI1 AXL GC19M041243 TRK-TTT10-1 ENSG00000269652
GH19F041229 0.5 ENCODE 0.4 +11.9 11937 2.3 BCOR PKNOX1 ZNF133 CHD4 ZNF266 YBX1 CDC5L ZNF48 ZNF121 POLR2A TMEM91 AXL CEACAM21 ENSG00000268355 ENSG00000269652 GC19M041243 TRK-TTT10-1
GH19F041217 1 FANTOM5 ENCODE 0.3 +19.2 19236 10.4 HDGF PKNOX1 ARNT CREB3L1 ARID4B SIN3A DMAP1 ZNF2 ZNF302 ZNF416 ZNF526 SNRPA ZNF574 ENSG00000269843 CCDC97 ENSG00000205041 ENSG00000268366 ITPKC SERTAD3 RPS19
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around TRK-TTT10-1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRK-TTT10-1 Gene

Chromosome:
19
Start:
41,242,237 bp from pter
End:
41,242,309 bp from pter
Size:
73 bases
Orientation:
Minus strand

Genomic View for TRK-TTT10-1 Gene

Genes around TRK-TTT10-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRK-TTT10-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRK-TTT10-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRK-TTT10-1 Gene

Proteins for TRK-TTT10-1 Gene

Post-translational modifications for TRK-TTT10-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRK-TTT10-1 Gene

Domains & Families for TRK-TTT10-1 Gene

Gene Families for TRK-TTT10-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRK-TTT10-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRK-TTT10-1 Gene

Function for TRK-TTT10-1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRK-TTT10-1 Gene

Localization for TRK-TTT10-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRK-TTT10-1 Gene

Pathways & Interactions for TRK-TTT10-1 Gene

SuperPathways for TRK-TTT10-1 Gene

No Data Available

Interacting Proteins for TRK-TTT10-1 Gene

Gene Ontology (GO) - Biological Process for TRK-TTT10-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRK-TTT10-1 Gene

Transcripts for TRK-TTT10-1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for TRK-TTT10-1 Gene

No ASD Table

Relevant External Links for TRK-TTT10-1 Gene

GeneLoc Exon Structure for
TRK-TTT10-1
ECgene alternative splicing isoforms for
TRK-TTT10-1

No data available for mRNA/cDNA for TRK-TTT10-1 Gene

Expression for TRK-TTT10-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TRK-TTT10-1 Gene

Orthologs for TRK-TTT10-1 Gene

No data available for Orthologs and Evolution for TRK-TTT10-1 Gene

Paralogs for TRK-TTT10-1 Gene

No data available for Paralogs for TRK-TTT10-1 Gene

Variants for TRK-TTT10-1 Gene

Relevant External Links for TRK-TTT10-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRK-TTT10-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRK-TTT10-1 Gene

Disorders for TRK-TTT10-1 Gene

No disorders were found for TRK-TTT10-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRK-TTT10-1 Gene

Publications for TRK-TTT10-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan P.P. … Lowe T.M. (Nucleic Acids Res. 2009) 3 64

Products for TRK-TTT10-1 Gene

Sources for TRK-TTT10-1 Gene

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