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Aliases for TRK-CTT4-1 Gene

Subcategory (RNA class) for TRK-CTT4-1 Gene

tRNA

Quality Score for this RNA gene is

2

Aliases for TRK-CTT4-1 Gene

  • Transfer RNA-Lys (CTT) 4-1 2 3
  • Transfer RNA Lysine 9 (Anticodon CUU) 2 3
  • TRNA-Lys-CTT-4-1 3
  • TRNAK9 3

External Ids for TRK-CTT4-1 Gene

ORGUL Members for TRK-CTT4-1 Gene

Previous HGNC Symbols for TRK-CTT4-1 Gene

  • TRNAK9

Summaries for TRK-CTT4-1 Gene

GeneCards Summary for TRK-CTT4-1 Gene

TRK-CTT4-1 (Transfer RNA-Lys (CTT) 4-1) is an RNA Gene, and is affiliated with the tRNA class.

Additional gene information for TRK-CTT4-1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRK-CTT4-1 Gene

Genomics for TRK-CTT4-1 Gene

Regulatory Elements for TRK-CTT4-1 Gene

Enhancers for TRK-CTT4-1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16H003191 0.8 ENCODE 0.7 +0.5 464 0 TBP ATF1 ARID4B KLF17 DEAF1 SIN3A ZNF2 POLR3A EGR1 HSF1 ZNF205 ZNF597 CREBBP ZNF75A ZNF174 E4F1 ZNF213-AS1 RNPS1 PDPK2P ZNF263
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRK-CTT4-1 on UCSC Golden Path with GeneCards custom track

Promoters for TRK-CTT4-1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000279477 -1901 401 ATF1 ARNT ARID4B SIN3A FEZF1 GLI4 ZNF2 GTF3C2 GLIS2 FOS

Genomic Location for TRK-CTT4-1 Gene

Chromosome:
16
Start:
3,191,501 bp from pter
End:
3,191,573 bp from pter
Size:
73 bases
Orientation:
Plus strand

Genomic View for TRK-CTT4-1 Gene

Genes around TRK-CTT4-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRK-CTT4-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRK-CTT4-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRK-CTT4-1 Gene

Proteins for TRK-CTT4-1 Gene

Post-translational modifications for TRK-CTT4-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRK-CTT4-1 Gene

Domains & Families for TRK-CTT4-1 Gene

Gene Families for TRK-CTT4-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRK-CTT4-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRK-CTT4-1 Gene

Function for TRK-CTT4-1 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TRK-CTT4-1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRK-CTT4-1 Gene

Localization for TRK-CTT4-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRK-CTT4-1 Gene

Pathways & Interactions for TRK-CTT4-1 Gene

SuperPathways for TRK-CTT4-1 Gene

No Data Available

Interacting Proteins for TRK-CTT4-1 Gene

Gene Ontology (GO) - Biological Process for TRK-CTT4-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRK-CTT4-1 Gene

Drugs & Compounds for TRK-CTT4-1 Gene

No Compound Related Data Available

Transcripts for TRK-CTT4-1 Gene

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TRK-CTT4-1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for TRK-CTT4-1 Gene

No ASD Table

Relevant External Links for TRK-CTT4-1 Gene

GeneLoc Exon Structure for
TRK-CTT4-1
ECgene alternative splicing isoforms for
TRK-CTT4-1

No data available for mRNA/cDNA for TRK-CTT4-1 Gene

Expression for TRK-CTT4-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRK-CTT4-1 Gene

Orthologs for TRK-CTT4-1 Gene

No data available for Orthologs and Evolution for TRK-CTT4-1 Gene

Paralogs for TRK-CTT4-1 Gene

No data available for Paralogs for TRK-CTT4-1 Gene

Variants for TRK-CTT4-1 Gene

Relevant External Links for TRK-CTT4-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRK-CTT4-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRK-CTT4-1 Gene

Disorders for TRK-CTT4-1 Gene

No disorders were found for TRK-CTT4-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRK-CTT4-1 Gene

Publications for TRK-CTT4-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 60

Products for TRK-CTT4-1 Gene

Sources for TRK-CTT4-1 Gene

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