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Aliases for TRK-CTT3-1 Gene

Subcategory (RNA class) for TRK-CTT3-1 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for TRK-CTT3-1 Gene

  • Transfer RNA-Lys (CTT) 3-1 2 3
  • Transfer RNA Lysine 15 (Anticodon CUU) 2 3
  • TRNA-Lys-CTT-3-1 3
  • RP11-473M20.16 5
  • TRNAK15 3

External Ids for TRK-CTT3-1 Gene

ORGUL Members for TRK-CTT3-1 Gene

Previous HGNC Symbols for TRK-CTT3-1 Gene

  • TRNAK15

Summaries for TRK-CTT3-1 Gene

GeneCards Summary for TRK-CTT3-1 Gene

TRK-CTT3-1 (Transfer RNA-Lys (CTT) 3-1) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRK-CTT3-1 Gene

Genomics for TRK-CTT3-1 Gene

Genomic Location for TRK-CTT3-1 Gene

Chromosome:
16
Start:
3,156,736 bp from pter
End:
3,157,483 bp from pter
Size:
748 bases
Orientation:
Minus strand

Genomic View for TRK-CTT3-1 Gene

Genes around TRK-CTT3-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRK-CTT3-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRK-CTT3-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRK-CTT3-1 Gene

No data available for Regulatory Elements for TRK-CTT3-1 Gene

Proteins for TRK-CTT3-1 Gene

Post-translational modifications for TRK-CTT3-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRK-CTT3-1 Gene

Domains & Families for TRK-CTT3-1 Gene

Gene Families for TRK-CTT3-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRK-CTT3-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRK-CTT3-1 Gene

Function for TRK-CTT3-1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRK-CTT3-1 Gene

Localization for TRK-CTT3-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRK-CTT3-1 Gene

Pathways & Interactions for TRK-CTT3-1 Gene

SuperPathways for TRK-CTT3-1 Gene

No Data Available

Interacting Proteins for TRK-CTT3-1 Gene

Gene Ontology (GO) - Biological Process for TRK-CTT3-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRK-CTT3-1 Gene

Drugs & Compounds for TRK-CTT3-1 Gene

No Compound Related Data Available

Transcripts for TRK-CTT3-1 Gene

mRNA/cDNA for TRK-CTT3-1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TRK-CTT3-1 Gene

No ASD Table

Relevant External Links for TRK-CTT3-1 Gene

GeneLoc Exon Structure for
TRK-CTT3-1
ECgene alternative splicing isoforms for
TRK-CTT3-1

Expression for TRK-CTT3-1 Gene

mRNA expression in normal human tissues for TRK-CTT3-1 Gene

genes like me logo Genes that share expression patterns with TRK-CTT3-1: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for TRK-CTT3-1 Gene

Orthologs for TRK-CTT3-1 Gene

Evolution for TRK-CTT3-1 Gene

ENSEMBL:
Gene Tree for TRK-CTT3-1 (if available)
TreeFam:
Gene Tree for TRK-CTT3-1 (if available)

No data available for Orthologs for TRK-CTT3-1 Gene

Paralogs for TRK-CTT3-1 Gene

No data available for Paralogs for TRK-CTT3-1 Gene

Variants for TRK-CTT3-1 Gene

Relevant External Links for TRK-CTT3-1 Gene

HapMap Linkage Disequilibrium report
TRK-CTT3-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRK-CTT3-1 Gene

Disorders for TRK-CTT3-1 Gene

No disorders were found for TRK-CTT3-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRK-CTT3-1 Gene

Publications for TRK-CTT3-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan P.P. … Lowe T.M. (Nucleic Acids Res. 2009) 3 67

Products for TRK-CTT3-1 Gene

Sources for TRK-CTT3-1 Gene

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