Free for academic non-profit institutions. Other users need a Commercial license

Aliases for TRIM53AP Gene

Aliases for TRIM53AP Gene

  • Tripartite Motif Containing 53A, Pseudogene 2 3
  • Tripartite Motif Containing 53, Pseudogene 2 3
  • Tripartite Motif-Containing 53 2 3
  • Tripartite Motif-Containing 49 Pseudogene 3
  • Tripartite Motif Containing 53 2
  • TRIM80P 3
  • TRIM53P 3
  • TRIM53 3

External Ids for TRIM53AP Gene

Previous HGNC Symbols for TRIM53AP Gene

  • TRIM53
  • TRIM53P

Previous GeneCards Identifiers for TRIM53AP Gene

  • GC11M089727

Summaries for TRIM53AP Gene

GeneCards Summary for TRIM53AP Gene

TRIM53AP (Tripartite Motif Containing 53A, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRIM53AP Gene

Genomics for TRIM53AP Gene

Genomic Location for TRIM53AP Gene

89,993,536 bp from pter
90,002,508 bp from pter
8,973 bases
Minus strand

Genomic View for TRIM53AP Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TRIM53AP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRIM53AP Gene

No data available for Regulatory Elements for TRIM53AP Gene

Proteins for TRIM53AP Gene

Post-translational modifications for TRIM53AP Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRIM53AP Gene

Domains for TRIM53AP Gene

Gene Families for TRIM53AP Gene

  • TRIMP :Triparite motif-containing / Pseudogenes

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRIM53AP: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRIM53AP Gene

Function for TRIM53AP Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for TRIM53AP Gene

Localization for TRIM53AP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRIM53AP Gene

Pathways for TRIM53AP Gene

SuperPathways for TRIM53AP Gene

No Data Available

Interacting Proteins for TRIM53AP Gene

Gene Ontology (GO) - Biological Process for TRIM53AP Gene


No data available for Pathways by source for TRIM53AP Gene

Transcripts for TRIM53AP Gene

mRNA/cDNA for TRIM53AP Gene

(3) Additional mRNA sequences :
(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for TRIM53AP Gene

Tripartite motif containing 53A, pseudogene:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for TRIM53AP

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRIM53AP Gene

No ASD Table

Relevant External Links for TRIM53AP Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for TRIM53AP Gene

mRNA expression in normal human tissues for TRIM53AP Gene

SOURCE GeneReport for Unigene cluster for TRIM53AP Gene Hs.647272

genes like me logo Genes that share expressions with TRIM53AP: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for TRIM53AP Gene

Orthologs for TRIM53AP Gene

Evolution for TRIM53AP Gene

Gene Tree for TRIM53AP (if available)
Gene Tree for TRIM53AP (if available)

No data available for Orthologs for TRIM53AP Gene

Paralogs for TRIM53AP Gene

No data available for Paralogs for TRIM53AP Gene

Variants for TRIM53AP Gene

Sequence variations from dbSNP and Humsavar for TRIM53AP Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type MAF
rs2388341 -- 90,002,601(-) TGCAA(A/G)GGTGT upstream-variant-2KB
rs11018808 -- 90,003,984(+) TCTTT(C/T)TGAGG upstream-variant-2KB
rs12421180 -- 90,003,699(+) tatat(A/T)atata upstream-variant-2KB
rs12421181 -- 90,003,708(+) tataa(A/T)atatt upstream-variant-2KB
rs12421195 -- 90,003,734(+) tatat(A/T)atata upstream-variant-2KB

Relevant External Links for TRIM53AP Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for TRIM53AP Gene

Disorders for TRIM53AP Gene

No disorders were found for TRIM53AP Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for TRIM53AP Gene

Publications for TRIM53AP Gene

  1. Identification of a genomic reservoir for new TRIM genes in primate genomes. (PMID: 22144910) Han K. … Sawyer S.L. (PLoS Genet. 2011) 3

Products for TRIM53AP Gene

Sources for TRIM53AP Gene

Back to Top