Free for academic non-profit institutions. Other users need a Commercial license

Aliases for TRIM51HP Gene

Aliases for TRIM51HP Gene

  • Tripartite Motif-Containing 51H, Pseudogene 2 3 5

External Ids for TRIM51HP Gene

Previous GeneCards Identifiers for TRIM51HP Gene

  • GC11M055061

Summaries for TRIM51HP Gene

GeneCards Summary for TRIM51HP Gene

TRIM51HP (Tripartite Motif-Containing 51H, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRIM51HP Gene

Genomics for TRIM51HP Gene

Genomic Location for TRIM51HP Gene

Chromosome:
11
Start:
55,291,883 bp from pter
End:
55,298,270 bp from pter
Size:
6,388 bases
Orientation:
Minus strand

Genomic View for TRIM51HP Gene

Genes around TRIM51HP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRIM51HP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRIM51HP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRIM51HP Gene

No data available for Regulatory Elements for TRIM51HP Gene

Proteins for TRIM51HP Gene

Post-translational modifications for TRIM51HP Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRIM51HP Gene

Domains & Families for TRIM51HP Gene

Gene Families for TRIM51HP Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRIM51HP: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRIM51HP Gene

Function for TRIM51HP Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRIM51HP Gene

Localization for TRIM51HP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRIM51HP Gene

Pathways & Interactions for TRIM51HP Gene

SuperPathways for TRIM51HP Gene

No Data Available

Interacting Proteins for TRIM51HP Gene

Gene Ontology (GO) - Biological Process for TRIM51HP Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRIM51HP Gene

Transcripts for TRIM51HP Gene

mRNA/cDNA for TRIM51HP Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TRIM51HP Gene

No ASD Table

Relevant External Links for TRIM51HP Gene

GeneLoc Exon Structure for
TRIM51HP
ECgene alternative splicing isoforms for
TRIM51HP

Expression for TRIM51HP Gene

mRNA expression in normal human tissues for TRIM51HP Gene

NURSA nuclear receptor signaling pathways regulating expression of TRIM51HP Gene:

TRIM51HP

SOURCE GeneReport for Unigene cluster for TRIM51HP Gene:

Hs.558954
genes like me logo Genes that share expression patterns with TRIM51HP: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TRIM51HP Gene

Orthologs for TRIM51HP Gene

Evolution for TRIM51HP Gene

ENSEMBL:
Gene Tree for TRIM51HP (if available)
TreeFam:
Gene Tree for TRIM51HP (if available)

No data available for Orthologs for TRIM51HP Gene

Paralogs for TRIM51HP Gene

No data available for Paralogs for TRIM51HP Gene

Variants for TRIM51HP Gene

Sequence variations from dbSNP and Humsavar for TRIM51HP Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs111629480 -- 55,295,191(+) AATCA(A/C)TGACT intron-variant
rs11229021 -- 55,293,763(+) TGCAA(A/G)GAGAA intron-variant
rs11229027 -- 55,295,583(+) TCCTC(A/G)CCCTC nc-transcript-variant
rs112363028 -- 55,296,970(+) TTTCC(C/T)GTTAT intron-variant
rs112614959 -- 55,297,429(+) TCACC(C/G)ATTTG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for TRIM51HP Gene

Variant ID Type Subtype PubMed ID
dgv1164n100 CNV gain 25217958
dgv1166n100 CNV gain 25217958
dgv1168n100 CNV loss 25217958
dgv1169n100 CNV loss 25217958
dgv1865n54 CNV gain 21841781
dgv1904n54 CNV gain 21841781
dgv1905n54 CNV gain 21841781
dgv362e212 CNV gain 25503493
esv2751030 CNV gain 17911159
esv2760193 CNV loss 21179565
esv3626423 CNV loss 21293372
esv3626424 CNV gain 21293372
esv3626425 CNV loss 21293372
esv3892009 CNV gain 25118596
nsv1047317 CNV gain 25217958
nsv321 CNV deletion 18451855
nsv524091 CNV gain 19592680
nsv832152 CNV gain+loss 17160897
nsv983021 CNV duplication 23825009

Relevant External Links for TRIM51HP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRIM51HP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for TRIM51HP Gene

Disorders for TRIM51HP Gene

Relevant External Links for TRIM51HP

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TRIM51HP

No disorders were found for TRIM51HP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TRIM51HP Gene

Publications for TRIM51HP Gene

  1. Human chromosome 11 DNA sequence and analysis including novel gene identification. (PMID: 16554811) Taylor T.D. … Sakaki Y. (Nature 2006) 3 64

Products for TRIM51HP Gene

Sources for TRIM51HP Gene

Content
Loading form....