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Aliases for TRIM31-AS1 Gene

Subcategory (RNA class) for TRIM31-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for TRIM31-AS1 Gene

  • TRIM31 Antisense RNA 1 2 3 5
  • TRIM31 Antisense RNA 1 (Non-Protein Coding) 2 3
  • XXbac-BPG250I8.13 3

External Ids for TRIM31-AS1 Gene

Previous GeneCards Identifiers for TRIM31-AS1 Gene

  • GC06P030076
  • GC06P030089
  • GC00U934725
  • GC06P030273
  • GC06P030305
  • GC06P030363
  • GC06P030515
  • GC06P030718
  • GC06P030882
  • GC06P031036

Summaries for TRIM31-AS1 Gene

GeneCards Summary for TRIM31-AS1 Gene

TRIM31-AS1 (TRIM31 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for TRIM31-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRIM31-AS1 Gene

Genomics for TRIM31-AS1 Gene

GeneHancer (GH) Regulatory Elements for TRIM31-AS1 Gene

Promoters and enhancers for TRIM31-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I030100 Enhancer 1.5 FANTOM5 Ensembl ENCODE 20 -3.2 -3160 3.9 FOXA2 MLX ARNT ARID4B SIN3A DMAP1 SLC30A9 ZNF143 SP3 SP5 HLA-K RPL23AP1 TRIM31-AS1 HCG4 MICD ZNRD1ASP HCG4P3 HLA-J ABCF1 HLA-W
GH06I030065 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 11.5 -38.4 -38435 3 ZFP64 DMAP1 YBX1 YY1 SLC30A9 E2F8 ZNF143 ZNF263 SP3 NFYC PPP1R11 HCG4P3 TRIM26 TRIM39 MDC1 PPP1R10 ZNRD1 HLA-A ETF1P1 PAIP1P1
GH06I030162 Promoter/Enhancer 1.5 EPDnew ENCODE 11.9 +58.5 58526 2.8 ZFP64 ARID4B DMAP1 YY1 SLC30A9 ZNF213 ZNF302 SP3 SP5 ZC3H11A TRIM10 TRIM15 MDC1 GTF2H4 HCG18 ZNRD1ASP PPP1R10 TRIM39 ETF1P1 PAIP1P1
GH06I030133 Promoter/Enhancer 1.4 EPDnew ENCODE 12.5 +30.4 30372 4.2 FOXA2 ARID4B DMAP1 ETS1 SLC30A9 ATF7 RUNX3 SP5 MIER2 PPARG TRIM40 TRIM31 HLA-K HLA-A HCG4P3 TRIM31-AS1 TRIM10 TRIM15 PPP1R10 TRIM39
GH06I030129 Enhancer 1.2 Ensembl ENCODE 13.1 +25.7 25668 3.1 HDGF PKNOX1 MLX ARNT ARID4B FEZF1 ZNF2 IRF4 ZNF143 DEK TRIM40 TRIM31 TRIM31-AS1 TRIM10 TRIM15 HLA-A HCG18 ENSG00000252228 GC06M030355
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TRIM31-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRIM31-AS1 Gene

Genomic Locations for TRIM31-AS1 Gene
chr6:30,105,240-30,114,724
(GRCh38/hg38)
Size:
9,485 bases
Orientation:
Plus strand

Genomic View for TRIM31-AS1 Gene

Genes around TRIM31-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRIM31-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRIM31-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for TRIM31-AS1 Gene

Post-translational modifications for TRIM31-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRIM31-AS1 Gene

Domains & Families for TRIM31-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRIM31-AS1 Gene

Function for TRIM31-AS1 Gene

Phenotypes From GWAS Catalog for TRIM31-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRIM31-AS1 Gene

Localization for TRIM31-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRIM31-AS1 Gene

Pathways & Interactions for TRIM31-AS1 Gene

SuperPathways for TRIM31-AS1 Gene

No Data Available

Interacting Proteins for TRIM31-AS1 Gene

Gene Ontology (GO) - Biological Process for TRIM31-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRIM31-AS1 Gene

Drugs & Compounds for TRIM31-AS1 Gene

No Compound Related Data Available

Transcripts for TRIM31-AS1 Gene

mRNA/cDNA for TRIM31-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRIM31-AS1 Gene

No ASD Table

Relevant External Links for TRIM31-AS1 Gene

GeneLoc Exon Structure for
TRIM31-AS1
ECgene alternative splicing isoforms for
TRIM31-AS1

Expression for TRIM31-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TRIM31-AS1 Gene

genes like me logo Genes that share expression patterns with TRIM31-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRIM31-AS1 Gene

Orthologs for TRIM31-AS1 Gene

Evolution for TRIM31-AS1 Gene

ENSEMBL:
Gene Tree for TRIM31-AS1 (if available)
TreeFam:
Gene Tree for TRIM31-AS1 (if available)

No data available for Orthologs for TRIM31-AS1 Gene

Paralogs for TRIM31-AS1 Gene

No data available for Paralogs for TRIM31-AS1 Gene

Variants for TRIM31-AS1 Gene

Sequence variations from dbSNP and Humsavar for TRIM31-AS1 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1000056229 -- 30,114,386(+) G/A intron_variant
rs1000968488 -- 30,109,589(+) T/C intron_variant
rs1002050978 -- 30,103,292(+) G/T upstream_transcript_variant
rs1002200034 -- 30,108,882(+) C/T intron_variant
rs1002286891 -- 30,109,682(+) A/T intron_variant

Additional Variant Information for TRIM31-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRIM31-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRIM31-AS1 Gene

Disorders for TRIM31-AS1 Gene

Additional Disease Information for TRIM31-AS1

No disorders were found for TRIM31-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TRIM31-AS1 Gene

Publications for TRIM31-AS1 Gene

No publications were found for TRIM31-AS1 Gene.

Products for TRIM31-AS1 Gene

Sources for TRIM31-AS1 Gene

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