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Aliases for TRI-GAT1-1 Gene

Subcategory (RNA class) for TRI-GAT1-1 Gene

tRNA

Quality Score for this RNA gene is

2

Aliases for TRI-GAT1-1 Gene

  • Transfer RNA-Ile (GAT) 1-1 2 3
  • Transfer RNA Isoleucine 7 (Anticodon GAU) 2 3
  • TRNA-Ile-GAT-1-1 3
  • TRNAI7 3

External Ids for TRI-GAT1-1 Gene

ORGUL Members for TRI-GAT1-1 Gene

Previous HGNC Symbols for TRI-GAT1-1 Gene

  • TRNAI7

Previous GeneCards Identifiers for TRI-GAT1-1 Gene

  • GC0XM003852
  • GC0XM003854

Summaries for TRI-GAT1-1 Gene

GeneCards Summary for TRI-GAT1-1 Gene

TRI-GAT1-1 (Transfer RNA-Ile (GAT) 1-1) is an RNA Gene, and is affiliated with the tRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRI-GAT1-1 Gene

Genomics for TRI-GAT1-1 Gene

Regulatory Elements for TRI-GAT1-1 Gene

Enhancers for TRI-GAT1-1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XG003813 1.8 FANTOM5 Ensembl ENCODE 0.3 +22.6 22594 4.5 HDGF PKNOX1 FOXA2 CREB3L1 AGO1 ARID4B SIN3A YY1 ZNF143 ZNF207 FAM239B PRKX LOC389906 GC0XP003806 GC0XM003863 TRI-GAT1-1
GH0XG003811 1.1 Ensembl ENCODE 0.3 +26.3 26310 0.5 CTCF PKNOX1 TBL1XR1 BACH1 ASH2L BMI1 RAD21 RELA ARID3A FOXK2 FAM239B LOC389906 GC0XP003806 TRI-GAT1-1 GC0XM003863
GH0XG003819 0.6 ENCODE 0.4 +18.1 18065 1.1 JUND BHLHE40 FOS NFE2 MAFK ATF2 FAM239B LOC389906 GC0XP003806 GC0XM003863 TRI-GAT1-1
GH0XG003812 0.8 ENCODE 0.3 +26.7 26656 0.2 PKNOX1 TBL1XR1 BACH1 ASH2L BMI1 EBF1 RELA ARID3A FOXK2 EED FAM239B GC0XP003806 GC0XM003863 TRI-GAT1-1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRI-GAT1-1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRI-GAT1-1 Gene

Chromosome:
X
Start:
3,838,377 bp from pter
End:
3,838,450 bp from pter
Size:
74 bases
Orientation:
Minus strand

Genomic View for TRI-GAT1-1 Gene

Genes around TRI-GAT1-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRI-GAT1-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRI-GAT1-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRI-GAT1-1 Gene

Proteins for TRI-GAT1-1 Gene

Post-translational modifications for TRI-GAT1-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRI-GAT1-1 Gene

Domains & Families for TRI-GAT1-1 Gene

Gene Families for TRI-GAT1-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRI-GAT1-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRI-GAT1-1 Gene

Function for TRI-GAT1-1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRI-GAT1-1 Gene

Localization for TRI-GAT1-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRI-GAT1-1 Gene

Pathways & Interactions for TRI-GAT1-1 Gene

SuperPathways for TRI-GAT1-1 Gene

No Data Available

Interacting Proteins for TRI-GAT1-1 Gene

Gene Ontology (GO) - Biological Process for TRI-GAT1-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRI-GAT1-1 Gene

Drugs & Compounds for TRI-GAT1-1 Gene

No Compound Related Data Available

Transcripts for TRI-GAT1-1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for TRI-GAT1-1 Gene

No ASD Table

Relevant External Links for TRI-GAT1-1 Gene

GeneLoc Exon Structure for
TRI-GAT1-1
ECgene alternative splicing isoforms for
TRI-GAT1-1

No data available for mRNA/cDNA for TRI-GAT1-1 Gene

Expression for TRI-GAT1-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRI-GAT1-1 Gene

Orthologs for TRI-GAT1-1 Gene

No data available for Orthologs and Evolution for TRI-GAT1-1 Gene

Paralogs for TRI-GAT1-1 Gene

No data available for Paralogs for TRI-GAT1-1 Gene

Variants for TRI-GAT1-1 Gene

Relevant External Links for TRI-GAT1-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRI-GAT1-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRI-GAT1-1 Gene

Disorders for TRI-GAT1-1 Gene

No disorders were found for TRI-GAT1-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRI-GAT1-1 Gene

Publications for TRI-GAT1-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan P.P. … Lowe T.M. (Nucleic Acids Res. 2009) 3 64

Products for TRI-GAT1-1 Gene

Sources for TRI-GAT1-1 Gene

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