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Aliases for TRI-AAT5-4 Gene

Subcategory (RNA class) for TRI-AAT5-4 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for TRI-AAT5-4 Gene

  • Transfer RNA-Ile (AAT) 5-4 2 3
  • Transfer RNA Isoleucine 15 (Anticodon AAU) 2 3
  • Transfer RNA-Ile (AAT) 5-1 2 3
  • TRNA-Ile-AAT-5-1 3
  • TRI-AAT5-1 3
  • TRNAI15 3

External Ids for TRI-AAT5-4 Gene

Previous HGNC Symbols for TRI-AAT5-4 Gene

  • TRNAI15
  • TRI-AAT5-1

Previous GeneCards Identifiers for TRI-AAT5-4 Gene

  • GC06M027177
  • GC14P102382
  • GC14P102453

Summaries for TRI-AAT5-4 Gene

GeneCards Summary for TRI-AAT5-4 Gene

TRI-AAT5-4 (Transfer RNA-Ile (AAT) 5-4) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRI-AAT5-4 Gene

Genomics for TRI-AAT5-4 Gene

Regulatory Elements for TRI-AAT5-4 Gene

Enhancers for TRI-AAT5-4 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14F102313 0.7 ENCODE 0.8 -2.7 -2734 1.2 ARID4B SIN3A DMAP1 ZNF2 ZNF143 ZNF207 ZNF263 SP5 MXD4 REST ZNF839 RCOR1 ENSG00000271780 CINP TECPR2 ENSG00000272444 TRI-AAT5-4 MOK
GH14F102306 0.4 ENCODE 0.4 -10.5 -10529 0.1 ZNF384 ZNF548 MOK TRI-AAT5-4
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around TRI-AAT5-4 on UCSC Golden Path with GeneCards custom track

Promoters for TRI-AAT5-4 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001625355 108 1601 PKNOX1 MLX WRNIP1 ARID4B SIN3A ZNF2 YY1 ZNF143 ZNF207 FOS

Genomic Location for TRI-AAT5-4 Gene

Chromosome:
14
Start:
102,317,092 bp from pter
End:
102,317,165 bp from pter
Size:
74 bases
Orientation:
Plus strand

Genomic View for TRI-AAT5-4 Gene

Genes around TRI-AAT5-4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRI-AAT5-4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRI-AAT5-4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRI-AAT5-4 Gene

Proteins for TRI-AAT5-4 Gene

Post-translational modifications for TRI-AAT5-4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRI-AAT5-4 Gene

Domains & Families for TRI-AAT5-4 Gene

Gene Families for TRI-AAT5-4 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRI-AAT5-4: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRI-AAT5-4 Gene

Function for TRI-AAT5-4 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRI-AAT5-4 Gene

Localization for TRI-AAT5-4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRI-AAT5-4 Gene

Pathways & Interactions for TRI-AAT5-4 Gene

SuperPathways for TRI-AAT5-4 Gene

No Data Available

Interacting Proteins for TRI-AAT5-4 Gene

Gene Ontology (GO) - Biological Process for TRI-AAT5-4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRI-AAT5-4 Gene

Transcripts for TRI-AAT5-4 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for TRI-AAT5-4 Gene

No ASD Table

Relevant External Links for TRI-AAT5-4 Gene

GeneLoc Exon Structure for
TRI-AAT5-4
ECgene alternative splicing isoforms for
TRI-AAT5-4

No data available for mRNA/cDNA for TRI-AAT5-4 Gene

Expression for TRI-AAT5-4 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TRI-AAT5-4 Gene

Orthologs for TRI-AAT5-4 Gene

No data available for Orthologs and Evolution for TRI-AAT5-4 Gene

Paralogs for TRI-AAT5-4 Gene

No data available for Paralogs for TRI-AAT5-4 Gene

Variants for TRI-AAT5-4 Gene

Relevant External Links for TRI-AAT5-4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRI-AAT5-4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRI-AAT5-4 Gene

Disorders for TRI-AAT5-4 Gene

No disorders were found for TRI-AAT5-4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRI-AAT5-4 Gene

Publications for TRI-AAT5-4 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan P.P. … Lowe T.M. (Nucleic Acids Res. 2009) 3 64

Products for TRI-AAT5-4 Gene

Sources for TRI-AAT5-4 Gene

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