Free for academic non-profit institutions. Other users need a Commercial license

Aliases for TRI-AAT5-4 Gene

Subcategory (RNA class) for TRI-AAT5-4 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for TRI-AAT5-4 Gene

  • Transfer RNA-Ile (AAT) 5-4 2 3
  • Transfer RNA Isoleucine 15 (Anticodon AAU) 2 3
  • Transfer RNA-Ile (AAT) 5-1 2 3
  • TRNA-Ile-AAT-5-1 3
  • TRI-AAT5-1 3
  • TRNAI15 3

External Ids for TRI-AAT5-4 Gene

Previous HGNC Symbols for TRI-AAT5-4 Gene

  • TRNAI15
  • TRI-AAT5-1

Previous GeneCards Identifiers for TRI-AAT5-4 Gene

  • GC06M027177
  • GC14P102382
  • GC14P102453
  • GC14P102463

Summaries for TRI-AAT5-4 Gene

GeneCards Summary for TRI-AAT5-4 Gene

TRI-AAT5-4 (Transfer RNA-Ile (AAT) 5-4) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRI-AAT5-4 Gene

Genomics for TRI-AAT5-4 Gene

Regulatory Elements for TRI-AAT5-4 Gene

Enhancers for TRI-AAT5-4 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14G102313 1.6 Ensembl ENCODE dbSUPER 0.7 -2.7 -2692 1.6 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 ZNF207 ZNF263 SP5 ZHX2 ZNF839 ENSG00000271780 TECPR2 CINP HSP90AA1 WDR20 ENSG00000272444 TRI-AAT5-4 MOK
GH14G102306 0.5 ENCODE 0.4 -10.5 -10529 0.1 KDM1A ZNF384 ZNF548 MOK TRI-AAT5-4
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRI-AAT5-4 on UCSC Golden Path with GeneCards custom track

Promoters for TRI-AAT5-4 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000073365 -92 1201 PKNOX1 MLX ARNT WRNIP1 ARID4B SIN3A ZNF2 ZBTB7B YY1 ZNF143

Genomic Location for TRI-AAT5-4 Gene

Chromosome:
14
Start:
102,317,092 bp from pter
End:
102,317,165 bp from pter
Size:
74 bases
Orientation:
Plus strand

Genomic View for TRI-AAT5-4 Gene

Genes around TRI-AAT5-4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRI-AAT5-4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRI-AAT5-4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRI-AAT5-4 Gene

Proteins for TRI-AAT5-4 Gene

Post-translational modifications for TRI-AAT5-4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRI-AAT5-4 Gene

Domains & Families for TRI-AAT5-4 Gene

Gene Families for TRI-AAT5-4 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRI-AAT5-4: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRI-AAT5-4 Gene

Function for TRI-AAT5-4 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRI-AAT5-4 Gene

Localization for TRI-AAT5-4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRI-AAT5-4 Gene

Pathways & Interactions for TRI-AAT5-4 Gene

SuperPathways for TRI-AAT5-4 Gene

No Data Available

Interacting Proteins for TRI-AAT5-4 Gene

Gene Ontology (GO) - Biological Process for TRI-AAT5-4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRI-AAT5-4 Gene

Drugs & Compounds for TRI-AAT5-4 Gene

No Compound Related Data Available

Transcripts for TRI-AAT5-4 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRI-AAT5-4 Gene

No ASD Table

Relevant External Links for TRI-AAT5-4 Gene

GeneLoc Exon Structure for
TRI-AAT5-4
ECgene alternative splicing isoforms for
TRI-AAT5-4

No data available for mRNA/cDNA for TRI-AAT5-4 Gene

Expression for TRI-AAT5-4 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRI-AAT5-4 Gene

Orthologs for TRI-AAT5-4 Gene

No data available for Orthologs and Evolution for TRI-AAT5-4 Gene

Paralogs for TRI-AAT5-4 Gene

No data available for Paralogs for TRI-AAT5-4 Gene

Variants for TRI-AAT5-4 Gene

Relevant External Links for TRI-AAT5-4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRI-AAT5-4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRI-AAT5-4 Gene

Disorders for TRI-AAT5-4 Gene

No disorders were found for TRI-AAT5-4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRI-AAT5-4 Gene

Publications for TRI-AAT5-4 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan P.P. … Lowe T.M. (Nucleic Acids Res. 2009) 3 64

Products for TRI-AAT5-4 Gene

Sources for TRI-AAT5-4 Gene

Content
Loading form....