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Aliases for TRI-AAT5-3 Gene

Subcategory (RNA class) for TRI-AAT5-3 Gene

non-coding RNA

Quality Score for this RNA gene is

2

Aliases for TRI-AAT5-3 Gene

  • Transfer RNA-Ile (AAT) 5-3 2 3
  • Transfer RNA Isoleucine 17 (Anticodon AAU) 2 3
  • Transfer RNA-Ile (AAT) 5-5 2 3
  • TRNA-Ile-AAT-5-5 3
  • TRI-AAT5-5 3
  • TRNAI17 3

External Ids for TRI-AAT5-3 Gene

Previous HGNC Symbols for TRI-AAT5-3 Gene

  • TRNAI17
  • TRI-AAT5-5

Previous GeneCards Identifiers for TRI-AAT5-3 Gene

  • GC06P026587
  • GC06P026644
  • GC06M027238

Summaries for TRI-AAT5-3 Gene

GeneCards Summary for TRI-AAT5-3 Gene

TRI-AAT5-3 (Transfer RNA-Ile (AAT) 5-3) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRI-AAT5-3 Gene

Genomics for TRI-AAT5-3 Gene

Regulatory Elements for TRI-AAT5-3 Gene

Enhancers for TRI-AAT5-3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06F027236 1.3 Ensembl ENCODE 0.8 -0.2 -249 2.6 HDGF ATF1 ARNT ZNF2 GTF3C2 CBX5 FOS SP3 NCOA1 REST BTN3A2 ABT1 ZNF204P ZNF391 ZNF192P1 ZKSCAN8 RNU6-471P BTN2A2 ZNF602P TRI-AAT5-3
GH06F027235 1.3 Ensembl ENCODE 0.8 +1.9 1878 1.5 PKNOX1 ARNT ZNF2 FOS ZNF263 SP3 REST KAT8 ZNF610 SMARCA4 BTN3A2 ZKSCAN8 ABT1 ZSCAN9 GUSBP2 ZNF322 ZNF204P RNU6-471P BTN2A2 ZNF192P1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRI-AAT5-3 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRI-AAT5-3 Gene

Chromosome:
6
Start:
27,237,571 bp from pter
End:
27,237,644 bp from pter
Size:
74 bases
Orientation:
Minus strand

Genomic View for TRI-AAT5-3 Gene

Genes around TRI-AAT5-3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRI-AAT5-3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRI-AAT5-3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRI-AAT5-3 Gene

Proteins for TRI-AAT5-3 Gene

Post-translational modifications for TRI-AAT5-3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRI-AAT5-3 Gene

Domains & Families for TRI-AAT5-3 Gene

Gene Families for TRI-AAT5-3 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRI-AAT5-3: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRI-AAT5-3 Gene

Function for TRI-AAT5-3 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRI-AAT5-3 Gene

Localization for TRI-AAT5-3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRI-AAT5-3 Gene

Pathways & Interactions for TRI-AAT5-3 Gene

SuperPathways for TRI-AAT5-3 Gene

No Data Available

Interacting Proteins for TRI-AAT5-3 Gene

Gene Ontology (GO) - Biological Process for TRI-AAT5-3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRI-AAT5-3 Gene

Transcripts for TRI-AAT5-3 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for TRI-AAT5-3 Gene

No ASD Table

Relevant External Links for TRI-AAT5-3 Gene

GeneLoc Exon Structure for
TRI-AAT5-3
ECgene alternative splicing isoforms for
TRI-AAT5-3

No data available for mRNA/cDNA for TRI-AAT5-3 Gene

Expression for TRI-AAT5-3 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TRI-AAT5-3 Gene

Orthologs for TRI-AAT5-3 Gene

No data available for Orthologs and Evolution for TRI-AAT5-3 Gene

Paralogs for TRI-AAT5-3 Gene

No data available for Paralogs for TRI-AAT5-3 Gene

Variants for TRI-AAT5-3 Gene

Relevant External Links for TRI-AAT5-3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRI-AAT5-3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRI-AAT5-3 Gene

Disorders for TRI-AAT5-3 Gene

No disorders were found for TRI-AAT5-3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRI-AAT5-3 Gene

Publications for TRI-AAT5-3 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan P.P. … Lowe T.M. (Nucleic Acids Res. 2009) 3 64

Products for TRI-AAT5-3 Gene

Sources for TRI-AAT5-3 Gene

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