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Aliases for TRHDE Gene

Aliases for TRHDE Gene

  • Thyrotropin-Releasing Hormone Degrading Enzyme 2 3
  • TRH-Specific Aminopeptidase 2 3 4
  • Pyroglutamyl-Peptidase II 2 3 4
  • Pyroglutamyl Aminopeptidase II 2 3
  • TRH-Degrading Ectoenzyme 3 4
  • Thyroliberinase 3 4
  • PAP-II 3 4
  • TRH-DE 3 4
  • Thyrotropin-Releasing Hormone Degrading Ectoenzyme 3
  • Thyrotropin-Releasing Hormone-Degrading Ectoenzyme 3
  • EC 3.4.19.6 4
  • PGPEP2 3

External Ids for TRHDE Gene

Summaries for TRHDE Gene

Entrez Gene Summary for TRHDE Gene

  • This gene encodes a member of the peptidase M1 family. The encoded protein is an extracellular peptidase that specifically cleaves and inactivates the neuropeptide thyrotropin-releasing hormone.[provided by RefSeq, Dec 2008]

GeneCards Summary for TRHDE Gene

TRHDE (Thyrotropin-Releasing Hormone Degrading Enzyme) is a Protein Coding gene. Diseases associated with TRHDE include good syndrome. GO annotations related to this gene include metallopeptidase activity and aminopeptidase activity. An important paralog of this gene is ERAP1.

UniProtKB/Swiss-Prot for TRHDE Gene

  • Specific inactivation of TRH after its release

No data available for Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRHDE Gene

Genomics for TRHDE Gene

Genomic Location for TRHDE Gene

Start:
72,087,266 bp from pter
End:
72,670,757 bp from pter
Size:
583,492 bases
Orientation:
Plus strand

Genomic View for TRHDE Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TRHDE Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRHDE Gene

Regulatory Elements for TRHDE Gene

Proteins for TRHDE Gene

  • Protein details for TRHDE Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9UKU6-TRHDE_HUMAN
    Recommended name:
    Thyrotropin-releasing hormone-degrading ectoenzyme
    Protein Accession:
    Q9UKU6
    Secondary Accessions:
    • A5PL19
    • Q6UWJ4

    Protein attributes for TRHDE Gene

    Size:
    1024 amino acids
    Molecular mass:
    117000 Da
    Cofactor:
    Name=Zn(2+); Xref=ChEBI:CHEBI:29105; Note=Binds 1 zinc ion per subunit.;
    Quaternary structure:
    • Homodimer; disulfide-linked.

neXtProt entry for TRHDE Gene

Proteomics data for TRHDE Gene at MOPED

Post-translational modifications for TRHDE Gene

  • Modification sites at PhosphoSitePlus
  • Glycosylation at Asn89, Asn160, Asn175, Asn222, Asn338, Asn605, Asn634, Asn649, Asn663, Asn684, Asn800, and Asn906

Other Protein References for TRHDE Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for TRHDE Gene

Domains for TRHDE Gene

Gene Families for TRHDE Gene

UniProtKB/Swiss-Prot:

TRHDE_HUMAN
Family:
  • Belongs to the peptidase M1 family.:
    • Q9UKU6
genes like me logo Genes that share domains with TRHDE: view

Function for TRHDE Gene

Molecular function for TRHDE Gene

GENATLAS Biochemistry: TRH (thyrotropin releasing hormone) degrading ectoenzyme specific neuropeptidase,restrictively expressed in tissue with highest expression in brain
UniProtKB/Swiss-Prot CatalyticActivity: Release of the N-terminal pyroglutamyl group from pGlu- -His-Xaa tripeptides and pGlu- -His-Xaa-Gly tetrapeptides
UniProtKB/Swiss-Prot Function: Specific inactivation of TRH after its release

Enzyme Numbers (IUBMB) for TRHDE Gene

Gene Ontology (GO) - Molecular Function for TRHDE Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004177 aminopeptidase activity IEA --
GO:0008237 metallopeptidase activity IEA --
GO:0008270 zinc ion binding IEA --
genes like me logo Genes that share ontologies with TRHDE: view

Phenotypes for TRHDE Gene

MGI mutant phenotypes for TRHDE:
inferred from 1 alleles
genes like me logo Genes that share phenotypes with TRHDE: view

No data available for Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for TRHDE Gene

Localization for TRHDE Gene

Subcellular locations from UniProtKB/Swiss-Prot for TRHDE Gene

Membrane; Single-pass type II membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for TRHDE Gene COMPARTMENTS Subcellular localization image for TRHDE gene
Compartment Confidence
plasma membrane 4
cytosol 1
endoplasmic reticulum 1
extracellular 1
mitochondrion 1

Gene Ontology (GO) - Cellular Components for TRHDE Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005887 integral component of plasma membrane TAS 10491199
GO:0070062 extracellular exosome IDA 23376485
genes like me logo Genes that share ontologies with TRHDE: view

Pathways for TRHDE Gene

SuperPathways for TRHDE Gene

No Data Available

Gene Ontology (GO) - Biological Process for TRHDE Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006508 proteolysis IEA --
GO:0007165 signal transduction TAS 10491199
GO:0007267 cell-cell signaling TAS 10491199
genes like me logo Genes that share ontologies with TRHDE: view

No data available for Pathways by source for TRHDE Gene

Compounds for TRHDE Gene

(4) Novoseek inferred chemical compound relationships for TRHDE Gene

Compound -log(P) Hits PubMed IDs
tripeptide 49.8 1
1,10-phenanthroline 48.4 1
sphingosine 47.7 1
12-o-tetradecanoylphorbol 13-acetate 41.2 2
genes like me logo Genes that share compounds with TRHDE: view

Transcripts for TRHDE Gene

Unigene Clusters for TRHDE Gene

Thyrotropin-releasing hormone degrading enzyme:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for TRHDE Gene

No ASD Table

Relevant External Links for TRHDE Gene

GeneLoc Exon Structure for
TRHDE
ECgene alternative splicing isoforms for
TRHDE

Expression for TRHDE Gene

mRNA expression in normal human tissues for TRHDE Gene

mRNA differential expression in normal tissues according to GTEx for TRHDE Gene

This gene is overexpressed in Pancreas (4.9).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for TRHDE Gene

SOURCE GeneReport for Unigene cluster for TRHDE Gene Hs.199814

mRNA Expression by UniProt/SwissProt for TRHDE Gene

Q9UKU6-TRHDE_HUMAN
Tissue specificity: Predominantly expressed in brain
genes like me logo Genes that share expressions with TRHDE: view

Orthologs for TRHDE Gene

This gene was present in the common ancestor of animals.

Orthologs for TRHDE Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia TRHDE 36
  • 98.83 (n)
  • 98.76 (a)
TRHDE 37
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia TRHDE 36
  • 92.7 (n)
  • 95.89 (a)
TRHDE 37
  • 96 (a)
OneToOne
dog
(Canis familiaris)
Mammalia TRHDE 36
  • 90.6 (n)
  • 93.86 (a)
TRHDE 37
  • 98 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Trhde 36
  • 90.14 (n)
  • 95.9 (a)
Trhde 16
Trhde 37
  • 96 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia TRHDE 37
  • 86 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia TRHDE 37
  • 91 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Trhde 36
  • 90.2 (n)
  • 95.8 (a)
chicken
(Gallus gallus)
Aves TRHDE 36
  • 83.97 (n)
  • 90.33 (a)
TRHDE 37
  • 90 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia -- 37
  • 65 (a)
OneToMany
-- 37
  • 82 (a)
OneToMany
tropical clawed frog
(Silurana tropicalis)
Amphibia trhde 36
  • 74.01 (n)
  • 78.78 (a)
zebrafish
(Danio rerio)
Actinopterygii LOC562409 36
  • 67.61 (n)
  • 68.02 (a)
TRHDE (1 of 2) 37
  • 68 (a)
OneToMany
TRHDE (2 of 2) 37
  • 67 (a)
OneToMany
fruit fly
(Drosophila melanogaster)
Insecta CG4467 37
  • 21 (a)
OneToMany
BG:DS00365.1 38
  • 27 (a)
CG6071 38
  • 24 (a)
CG11951 38
  • 34 (a)
sda 38
  • 29 (a)
CG5849 38
  • 27 (a)
CG2111 38
  • 29 (a)
CG3502 38
  • 27 (a)
CG9806 38
  • 27 (a)
CG14516 38
  • 32 (a)
CG4467 38
  • 25 (a)
SP1029 38
  • 30 (a)
worm
(Caenorhabditis elegans)
Secernentea F49B2.6 37
  • 25 (a)
OneToMany
R03G8.4 38
  • 28 (a)
T07F10.1 38
  • 29 (a)
Y42A5A.1 38
  • 26 (a)
T16G12.1 38
  • 26 (a)
AC3.5 38
  • 22 (a)
R03G8.6 38
  • 27 (a)
Y67D8C.9 38
  • 33 (a)
Species with no ortholog for TRHDE:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for TRHDE Gene

ENSEMBL:
Gene Tree for TRHDE (if available)
TreeFam:
Gene Tree for TRHDE (if available)

Paralogs for TRHDE Gene

Paralogs for TRHDE Gene

Selected SIMAP similar genes for TRHDE Gene using alignment to 2 proteins:

genes like me logo Genes that share paralogs with TRHDE: view

Variants for TRHDE Gene

Sequence variations from dbSNP and Humsavar for TRHDE Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type MAF
rs177616 -- 72,613,800(+) TTTCT(C/G)TGTGC intron-variant
rs184916 -- 72,629,678(+) TTGTA(A/C)TAAGA intron-variant
rs186253 -- 72,617,482(-) AAGTG(C/G)ACAGG intron-variant
rs191028 -- 72,612,960(+) GAGAA(A/G)AAATG intron-variant
rs192782 -- 72,617,454(-) TTCAT(C/T)TTCGT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for TRHDE Gene

Variant ID Type Subtype PubMed ID
esv2422452 CNV Duplication 17116639
nsv899257 CNV Loss 21882294
nsv832452 CNV Gain 17160897
nsv899258 CNV Gain 21882294
nsv469465 CNV Gain 19166990
nsv771 CNV Insertion 18451855
esv269831 CNV Insertion 20981092
esv274378 CNV Insertion 20981092
esv2746052 CNV Deletion 23290073
esv2166520 CNV Deletion 18987734
esv2666571 CNV Deletion 23128226
esv2746054 CNV Deletion 23290073
esv1226093 CNV Deletion 17803354
esv23503 CNV Loss 19812545
esv1942657 CNV Deletion 18987734
esv2746055 CNV Deletion 23290073
nsv832453 CNV Gain+Loss 17160897
nsv772 CNV Loss 18451855
esv2676770 CNV Deletion 23128226
nsv521839 CNV Loss 19592680
nsv469466 CNV Loss 19166990
nsv818925 CNV Loss 17921354
nsv899259 CNV Loss 21882294
nsv899260 CNV Loss 21882294
nsv832454 CNV Gain 17160897
esv2746056 CNV Deletion 23290073
esv3786 CNV Deletion 18987735
esv987864 CNV Deletion 20482838
esv2661304 CNV Deletion 23128226
esv2746057 CNV Deletion 23290073
dgv520e1 CNV Complex 17122850

Relevant External Links for TRHDE Gene

HapMap Linkage Disequilibrium report
TRHDE

Disorders for TRHDE Gene

(1) MalaCards Diseases for TRHDE Gene

Search for TRHDE Gene in MalaCards »

(2) University of Copenhagen DISEASES for TRHDE Gene

(1) Novoseek inferred disease relationships for TRHDE Gene

Disease -log(P) Hits PubMed IDs
retinoblastoma 33.3 3

Relevant External Links for TRHDE

Genetic Association Database (GAD)
TRHDE
Human Genome Epidemiology (HuGE) Navigator
TRHDE
genes like me logo Genes that share disorders with TRHDE: view

No data available for UniProtKB/Swiss-Prot for TRHDE Gene

Publications for TRHDE Gene

  1. Human TRH-degrading ectoenzyme cDNA cloning, functional expression, genomic structure and chromosomal assignment. (PMID: 10491199) Schomburg L. … Bauer K. (Eur. J. Biochem. 1999) 2 3 4 23
  2. The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. (PMID: 12975309) Clark H.F. … Gray A.M. (Genome Res. 2003) 2 3 4
  3. Chemerin, a novel adipokine in the regulation of angiogenesis. (PMID: 20237162) Bozaoglu K. … Jowett J.B. (J. Clin. Endocrinol. Metab. 2010) 3 49
  4. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose J.E. … Uhl G.R. (Mol. Med. 2010) 3 49
  5. Variation at the NFATC2 locus increases the risk of thiazolidinedione-induced edema in the Diabetes REduction Assessment with ramipril and rosiglitazone Medication (DREAM) study. (PMID: 20628086) Bailey S.D. … Anand S. (Diabetes Care 2010) 3 49

Products for TRHDE Gene

Sources for TRHDE Gene

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