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Aliases for TRH-GTG1-8 Gene

Subcategory (RNA class) for TRH-GTG1-8 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for TRH-GTG1-8 Gene

  • Transfer RNA-His (GTG) 1-8 2 3
  • Transfer RNA Histidine 2 (Anticodon GUG) 2 3
  • Transfer RNA-His (GTG) 1-6 2 3
  • TRNA-His-GTG-1-6 3
  • CTD-2651B20.6 5
  • TRH-GTG1-6 3
  • TRNAH2 3

External Ids for TRH-GTG1-8 Gene

ORGUL Members for TRH-GTG1-8 Gene

Previous HGNC Symbols for TRH-GTG1-8 Gene

  • TRNAH2
  • TRH-GTG1-6

Previous GeneCards Identifiers for TRH-GTG1-8 Gene

  • GC06P027162
  • GC06P027171

Summaries for TRH-GTG1-8 Gene

GeneCards Summary for TRH-GTG1-8 Gene

TRH-GTG1-8 (Transfer RNA-His (GTG) 1-8) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRH-GTG1-8 Gene

Genomics for TRH-GTG1-8 Gene

Regulatory Elements for TRH-GTG1-8 Gene

Enhancers for TRH-GTG1-8 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15G045197 1.4 ENCODE dbSUPER 0.7 +0.7 707 4.3 MLX CREB3L1 DMAP1 YY1 ZNF143 ZNF263 NFYC TBX21 MEF2D SSRP1 CTDSPL2 ENSG00000259563 EIF3J-AS1 HNRNPMP1 DUOX1 ENSG00000259539 BLOC1S6 SLC28A2 LOC101928414 DUOX2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRH-GTG1-8 on UCSC Golden Path with GeneCards custom track

Promoters for TRH-GTG1-8 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000076010 932 3801 MLX CREB3L1 FEZF1 DMAP1 YY1 ZNF143 ZNF263 NFYC TBX21 MEF2D

Genomic Location for TRH-GTG1-8 Gene

Chromosome:
15
Start:
45,200,325 bp from pter
End:
45,200,632 bp from pter
Size:
308 bases
Orientation:
Minus strand

Genomic View for TRH-GTG1-8 Gene

Genes around TRH-GTG1-8 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRH-GTG1-8 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRH-GTG1-8 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRH-GTG1-8 Gene

Proteins for TRH-GTG1-8 Gene

Post-translational modifications for TRH-GTG1-8 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRH-GTG1-8 Gene

Domains & Families for TRH-GTG1-8 Gene

Gene Families for TRH-GTG1-8 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRH-GTG1-8: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRH-GTG1-8 Gene

Function for TRH-GTG1-8 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRH-GTG1-8 Gene

Localization for TRH-GTG1-8 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRH-GTG1-8 Gene

Pathways & Interactions for TRH-GTG1-8 Gene

SuperPathways for TRH-GTG1-8 Gene

No Data Available

Interacting Proteins for TRH-GTG1-8 Gene

Gene Ontology (GO) - Biological Process for TRH-GTG1-8 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRH-GTG1-8 Gene

Drugs & Compounds for TRH-GTG1-8 Gene

No Compound Related Data Available

Transcripts for TRH-GTG1-8 Gene

mRNA/cDNA for TRH-GTG1-8 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRH-GTG1-8 Gene

No ASD Table

Relevant External Links for TRH-GTG1-8 Gene

GeneLoc Exon Structure for
TRH-GTG1-8
ECgene alternative splicing isoforms for
TRH-GTG1-8

Expression for TRH-GTG1-8 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRH-GTG1-8 Gene

Orthologs for TRH-GTG1-8 Gene

Evolution for TRH-GTG1-8 Gene

ENSEMBL:
Gene Tree for TRH-GTG1-8 (if available)
TreeFam:
Gene Tree for TRH-GTG1-8 (if available)

No data available for Orthologs for TRH-GTG1-8 Gene

Paralogs for TRH-GTG1-8 Gene

No data available for Paralogs for TRH-GTG1-8 Gene

Variants for TRH-GTG1-8 Gene

Relevant External Links for TRH-GTG1-8 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRH-GTG1-8

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRH-GTG1-8 Gene

Disorders for TRH-GTG1-8 Gene

No disorders were found for TRH-GTG1-8 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRH-GTG1-8 Gene

Publications for TRH-GTG1-8 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan P.P. … Lowe T.M. (Nucleic Acids Res. 2009) 3 64

Products for TRH-GTG1-8 Gene

Sources for TRH-GTG1-8 Gene

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