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Aliases for TRH-GTG1-6 Gene

Subcategory (RNA class) for TRH-GTG1-6 Gene

tRNA

Quality Score for this RNA gene is

2

Aliases for TRH-GTG1-6 Gene

  • Transfer RNA-His (GTG) 1-6 2 3
  • Transfer RNA Histidine 5 (Anticodon GUG) 2 3
  • Transfer RNA-His (GTG) 1-9 2 3
  • TRNA-His-GTG-1-9 3
  • TRH-GTG1-9 3
  • TRNAH5 3

External Ids for TRH-GTG1-6 Gene

ORGUL Members for TRH-GTG1-6 Gene

Previous HGNC Symbols for TRH-GTG1-6 Gene

  • TRNAH5
  • TRH-GTG1-9

Previous GeneCards Identifiers for TRH-GTG1-6 Gene

  • GC15M045200

Summaries for TRH-GTG1-6 Gene

GeneCards Summary for TRH-GTG1-6 Gene

TRH-GTG1-6 (Transfer RNA-His (GTG) 1-6) is an RNA Gene, and is affiliated with the tRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRH-GTG1-6 Gene

Genomics for TRH-GTG1-6 Gene

Regulatory Elements for TRH-GTG1-6 Gene

Enhancers for TRH-GTG1-6 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09F014432 1.1 Ensembl ENCODE 0.8 +0.3 343 2.3 TBP HDAC1 TBL1XR1 SREBF2 ZNF2 RAD21 KAT2B GTF3C2 GATA2 POLR3A GC09P014433 TRH-GTG1-6
GH09F014437 0.6 Ensembl 0.8 -3.8 -3790 0.4 ZNF263 GLIS2 GLIS1 ZNF341 ZBTB33 PRDM10 FOXP2 ZIC2 TRH-GTG1-6 PIR40398
GH09F014438 0.4 ENCODE 0.8 -4.4 -4427 0.2 FOXP2 TRH-GTG1-6 PIR40398
GH09F014439 0.4 ENCODE 0.8 -3.5 -3487 0.2 GLIS1 ZNF341 TRH-GTG1-6 PIR40398
GH09F014442 0.6 ENCODE 0.4 -8.5 -8467 0.2 CTCF CBX1 TAL1 SMC3 ZBTB33 ZNF644 RAD21 CREM TRH-GTG1-6 PIR40398
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRH-GTG1-6 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRH-GTG1-6 Gene

Chromosome:
9
Start:
14,433,940 bp from pter
End:
14,434,011 bp from pter
Size:
72 bases
Orientation:
Minus strand

Genomic View for TRH-GTG1-6 Gene

Genes around TRH-GTG1-6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRH-GTG1-6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRH-GTG1-6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRH-GTG1-6 Gene

Proteins for TRH-GTG1-6 Gene

Post-translational modifications for TRH-GTG1-6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRH-GTG1-6 Gene

Domains & Families for TRH-GTG1-6 Gene

Gene Families for TRH-GTG1-6 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRH-GTG1-6: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRH-GTG1-6 Gene

Function for TRH-GTG1-6 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRH-GTG1-6 Gene

Localization for TRH-GTG1-6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRH-GTG1-6 Gene

Pathways & Interactions for TRH-GTG1-6 Gene

SuperPathways for TRH-GTG1-6 Gene

No Data Available

Interacting Proteins for TRH-GTG1-6 Gene

Gene Ontology (GO) - Biological Process for TRH-GTG1-6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRH-GTG1-6 Gene

Transcripts for TRH-GTG1-6 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for TRH-GTG1-6 Gene

No ASD Table

Relevant External Links for TRH-GTG1-6 Gene

GeneLoc Exon Structure for
TRH-GTG1-6
ECgene alternative splicing isoforms for
TRH-GTG1-6

No data available for mRNA/cDNA for TRH-GTG1-6 Gene

Expression for TRH-GTG1-6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for TRH-GTG1-6 Gene

genes like me logo Genes that share expression patterns with TRH-GTG1-6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TRH-GTG1-6 Gene

Orthologs for TRH-GTG1-6 Gene

No data available for Orthologs and Evolution for TRH-GTG1-6 Gene

Paralogs for TRH-GTG1-6 Gene

No data available for Paralogs for TRH-GTG1-6 Gene

Variants for TRH-GTG1-6 Gene

Relevant External Links for TRH-GTG1-6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRH-GTG1-6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRH-GTG1-6 Gene

Disorders for TRH-GTG1-6 Gene

No disorders were found for TRH-GTG1-6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRH-GTG1-6 Gene

Publications for TRH-GTG1-6 Gene

  1. A mammalian tRNAHis-containing antigen is recognized by the polymyositis-specific antibody anti-Jo-1. (PMID: 6188108) Rosa M.D. … Reichlin M. (Nucleic Acids Res. 1983) 2 3 64
  2. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan P.P. … Lowe T.M. (Nucleic Acids Res. 2009) 3 64

Products for TRH-GTG1-6 Gene

Sources for TRH-GTG1-6 Gene

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