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Aliases for TRH-GTG1-6 Gene

Subcategory (RNA class) for TRH-GTG1-6 Gene

tRNA

Quality Score for this RNA gene is

2

Aliases for TRH-GTG1-6 Gene

  • Transfer RNA-His (GTG) 1-6 2 3
  • Transfer RNA Histidine 5 (Anticodon GUG) 2 3
  • Transfer RNA-His (GTG) 1-9 2 3
  • TRNA-His-GTG-1-9 3
  • TRH-GTG1-9 3
  • TRNAH5 3

External Ids for TRH-GTG1-6 Gene

ORGUL Members for TRH-GTG1-6 Gene

Previous HGNC Symbols for TRH-GTG1-6 Gene

  • TRNAH5
  • TRH-GTG1-9

Previous GeneCards Identifiers for TRH-GTG1-6 Gene

  • GC15M045200

Summaries for TRH-GTG1-6 Gene

GeneCards Summary for TRH-GTG1-6 Gene

TRH-GTG1-6 (Transfer RNA-His (GTG) 1-6) is an RNA Gene, and is affiliated with the tRNA class.

Additional gene information for TRH-GTG1-6 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRH-GTG1-6 Gene

Genomics for TRH-GTG1-6 Gene

GeneHancer (GH) Regulatory Elements for TRH-GTG1-6 Gene

Promoters and enhancers for TRH-GTG1-6 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09I014432 Enhancer 1 Ensembl ENCODE 550.8 +0.3 342 2.3 HDAC1 ARNT SREBF2 ZNF2 RAD21 GTF3C2 TCF12 ZNF213 POLR3A FOS GC09P014433 TRH-GTG1-6 CDCA4P1 ZDHHC21 SNAPC3
GH09I014437 Enhancer 0.6 Ensembl 0.8 -3.8 -3790 0.4 ZSCAN4 ZNF398 ZIC2 NFIC GLIS1 FOXP2 ZBTB33 RCOR1 PRDM10 CHD2 TRH-GTG1-6 PIR40398
GH09I014438 Enhancer 0.3 ENCODE 0.8 -4.4 -4427 0.2 FOXP2 TRH-GTG1-6 PIR40398
GH09I014439 Enhancer 0.3 ENCODE 0.8 -3.5 -3487 0.2 GLIS1 TRH-GTG1-6 PIR40398
GH09I014466 Enhancer 0.7 ENCODE 0.3 -31.7 -31667 0.2 CTCF ZSCAN4 ZNF2 RAD21 CC2D1A CTBP1 SMC3 ZNF143 ZNF444 CREM TRH-GTG1-6 PIR40398
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TRH-GTG1-6 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRH-GTG1-6 Gene

Genomic Locations for TRH-GTG1-6 Gene
chr9:14,433,940-14,434,011
(GRCh38/hg38)
Size:
72 bases
Orientation:
Minus strand
chr9:14,433,938-14,434,009
(GRCh37/hg19)

Genomic View for TRH-GTG1-6 Gene

Genes around TRH-GTG1-6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRH-GTG1-6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRH-GTG1-6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRH-GTG1-6 Gene

Proteins for TRH-GTG1-6 Gene

Post-translational modifications for TRH-GTG1-6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRH-GTG1-6 Gene

Domains & Families for TRH-GTG1-6 Gene

Gene Families for TRH-GTG1-6 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRH-GTG1-6: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRH-GTG1-6 Gene

Function for TRH-GTG1-6 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRH-GTG1-6 Gene

Localization for TRH-GTG1-6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRH-GTG1-6 Gene

Pathways & Interactions for TRH-GTG1-6 Gene

SuperPathways for TRH-GTG1-6 Gene

No Data Available

Interacting Proteins for TRH-GTG1-6 Gene

Gene Ontology (GO) - Biological Process for TRH-GTG1-6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRH-GTG1-6 Gene

Drugs & Compounds for TRH-GTG1-6 Gene

No Compound Related Data Available

Transcripts for TRH-GTG1-6 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRH-GTG1-6 Gene

No ASD Table

Relevant External Links for TRH-GTG1-6 Gene

GeneLoc Exon Structure for
TRH-GTG1-6
ECgene alternative splicing isoforms for
TRH-GTG1-6

No data available for mRNA/cDNA for TRH-GTG1-6 Gene

Expression for TRH-GTG1-6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TRH-GTG1-6 Gene

genes like me logo Genes that share expression patterns with TRH-GTG1-6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRH-GTG1-6 Gene

Orthologs for TRH-GTG1-6 Gene

No data available for Orthologs and Evolution for TRH-GTG1-6 Gene

Paralogs for TRH-GTG1-6 Gene

No data available for Paralogs for TRH-GTG1-6 Gene

Variants for TRH-GTG1-6 Gene

Additional Variant Information for TRH-GTG1-6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRH-GTG1-6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRH-GTG1-6 Gene

Disorders for TRH-GTG1-6 Gene

No disorders were found for TRH-GTG1-6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRH-GTG1-6 Gene

Publications for TRH-GTG1-6 Gene

  1. A mammalian tRNAHis-containing antigen is recognized by the polymyositis-specific antibody anti-Jo-1. (PMID: 6188108) Rosa MD … Reichlin M (Nucleic acids research 1983) 2 3 58
  2. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 58

Products for TRH-GTG1-6 Gene

Sources for TRH-GTG1-6 Gene

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