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Aliases for TRGVA Gene

Subcategory (RNA class) for TRGVA Gene

lncRNA

Aliases for TRGVA Gene

  • T-Cell Receptor Gamma Variable A (Pseudogene) 2 5
  • T-Cell Receptor, Gamma, Variable Region VA (Pseudogene) 2 3
  • T Cell Receptor Gamma Variable A (Pseudogene) 2 3
  • T Cell Receptor Gamma Variable A Pseudogene 2
  • T Cell Receptor Gamma Variable A 2
  • TCRGVA 3
  • V5P 3

External Ids for TRGVA Gene

ORGUL Members for TRGVA Gene

Previous HGNC Symbols for TRGVA Gene

  • TCRGVA

Previous GeneCards Identifiers for TRGVA Gene

  • GC07U990117
  • GC07M038068
  • GC07M038102
  • GC07M038135
  • GC07M038328
  • GC07M038363
  • GC07M038249
  • GC07M038365
  • GC07M038366
  • GC07M038421
  • GC07M038571
  • GC07M038899
  • GC07M039027
  • GC07M039185
  • GC07M038449
  • GC07M038457
  • GC07M038471
  • GC07M038483
  • GC07M038495
  • GC07M038509

Summaries for TRGVA Gene

GeneCards Summary for TRGVA Gene

TRGVA (T-Cell Receptor Gamma Variable A (Pseudogene)) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for TRGVA Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRGVA Gene

Genomics for TRGVA Gene

Regulatory Elements for TRGVA Gene

Enhancers for TRGVA Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07H038321 1.1 Ensembl ENCODE dbSUPER 0.7 +1.3 1324 0 FOSL1 ZFHX2 JUND EGR1 JUN FOS KDM1A STARD3NL TRGV9 TRGVA
GH07H038327 0.5 ENCODE dbSUPER 0.7 -4.8 -4824 1 ENSG00000272908 STARD3NL GC07P038328 TRGVA
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRGVA on UCSC Golden Path with GeneCards custom track

Genomic Location for TRGVA Gene

Chromosome:
7
Start:
38,322,446 bp from pter
End:
38,322,863 bp from pter
Size:
418 bases
Orientation:
Minus strand

Genomic View for TRGVA Gene

Genes around TRGVA on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRGVA Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRGVA Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRGVA Gene

Proteins for TRGVA Gene

Post-translational modifications for TRGVA Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRGVA Gene

Domains & Families for TRGVA Gene

Gene Families for TRGVA Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRGVA: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRGVA Gene

Function for TRGVA Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TRGVA
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRGVA Gene

Localization for TRGVA Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRGVA Gene

Pathways & Interactions for TRGVA Gene

SuperPathways for TRGVA Gene

No Data Available

Interacting Proteins for TRGVA Gene

Gene Ontology (GO) - Biological Process for TRGVA Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRGVA Gene

Drugs & Compounds for TRGVA Gene

No Compound Related Data Available

Transcripts for TRGVA Gene

mRNA/cDNA for TRGVA Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TRGVA
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for TRGVA Gene

No ASD Table

Relevant External Links for TRGVA Gene

GeneLoc Exon Structure for
TRGVA
ECgene alternative splicing isoforms for
TRGVA

Expression for TRGVA Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TRGVA Gene

NURSA nuclear receptor signaling pathways regulating expression of TRGVA Gene:

TRGVA
genes like me logo Genes that share expression patterns with TRGVA: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRGVA Gene

Orthologs for TRGVA Gene

Evolution for TRGVA Gene

ENSEMBL:
Gene Tree for TRGVA (if available)
TreeFam:
Gene Tree for TRGVA (if available)

No data available for Orthologs for TRGVA Gene

Paralogs for TRGVA Gene

No data available for Paralogs for TRGVA Gene

Variants for TRGVA Gene

Relevant External Links for TRGVA Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRGVA

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRGVA Gene

Disorders for TRGVA Gene

No disorders were found for TRGVA Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRGVA Gene

Publications for TRGVA Gene

  1. Variable region genes in the human T-cell rearranging gamma (TRG) locus: V-J junction and homology with the mouse genes. (PMID: 2969332) Huck S … Lefranc MP (The EMBO journal 1988) 2 3 60
  2. The human T-cell receptor gamma (TRG) genes. (PMID: 2527426) Lefranc MP … Rabbitts TH (Trends in biochemical sciences 1989) 3 60

Products for TRGVA Gene

Sources for TRGVA Gene

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