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Aliases for TRGV9 Gene

Aliases for TRGV9 Gene

  • T Cell Receptor Gamma Variable 9 2 3
  • T-Cell Receptor, Gamma, Variable Region V9 3
  • Variable Region V9 2
  • T-Cell Receptor 2
  • TCRGV9 3
  • Gamma 2
  • TRGC1 3
  • V2 3

External Ids for TRGV9 Gene

Previous HGNC Symbols for TRGV9 Gene

  • TCRGV9

Previous GeneCards Identifiers for TRGV9 Gene

  • GC07M038002
  • GC07M038062
  • GC07M038096
  • GC07M038054
  • GC07M038131
  • GC07M038245
  • GC07M038324
  • GC07M038298
  • GC07M038356
  • GC07M038396

Summaries for TRGV9 Gene

GeneCards Summary for TRGV9 Gene

TRGV9 (T Cell Receptor Gamma Variable 9) is a Protein Coding gene. An important paralog of this gene is TRGV11.

Gene Wiki entry for TRGV9 Gene

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRGV9 Gene

Genomics for TRGV9 Gene

Genomic Location for TRGV9 Gene

Start:
38,317,017 bp from pter
End:
38,318,861 bp from pter
Size:
1,845 bases
Orientation:
Minus strand

Genomic View for TRGV9 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TRGV9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRGV9 Gene

No data available for Regulatory Elements for TRGV9 Gene

Proteins for TRGV9 Gene

  • Protein details for TRGV9 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    Q99603
    Recommended name:
    Protein TRGV9
    Protein Accession:
    Q99603
    Secondary Accessions:

    Protein attributes for TRGV9 Gene

    Size:
    122 amino acids
    Molecular mass:
    13414 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TRGV9 Gene

Proteomics data for TRGV9 Gene at MOPED

Post-translational modifications for TRGV9 Gene

No Post-translational modifications

Other Protein References for TRGV9 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for TRGV9 Gene

Domains for TRGV9 Gene

Gene Families for TRGV9 Gene

HGNC:
  • TRG :T cell receptors / TRG locus

Protein Domains for TRGV9 Gene

Suggested Antigen Peptide Sequences for TRGV9 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRGV9: view

No data available for UniProtKB/Swiss-Prot for TRGV9 Gene

Function for TRGV9 Gene

Gene Ontology (GO) - Molecular Function for TRGV9 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding --
GO:0042287 MHC protein binding --
GO:0042605 peptide antigen binding --
genes like me logo Genes that share ontologies with TRGV9: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for TRGV9 Gene

Localization for TRGV9 Gene

Gene Ontology (GO) - Cellular Components for TRGV9 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005887 integral component of plasma membrane --
genes like me logo Genes that share ontologies with TRGV9: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Subcellular locations from COMPARTMENTS for TRGV9 Gene

Pathways for TRGV9 Gene

SuperPathways for TRGV9 Gene

No Data Available

Interacting Proteins for TRGV9 Gene

Gene Ontology (GO) - Biological Process for TRGV9 Gene

None

No data available for Pathways by source for TRGV9 Gene

Transcripts for TRGV9 Gene

mRNA/cDNA for TRGV9 Gene

(359) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TRGV9 Gene

No ASD Table

Relevant External Links for TRGV9 Gene

GeneLoc Exon Structure for
TRGV9
ECgene alternative splicing isoforms for
TRGV9

Expression for TRGV9 Gene

mRNA expression in normal human tissues for TRGV9 Gene

mRNA differential expression in normal tissues according to GTEx for TRGV9 Gene

This gene is overexpressed in Whole Blood (20.4), Prostate (8.5), and Spleen (4.1).
genes like me logo Genes that share expressions with TRGV9: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for TRGV9 Gene

Orthologs for TRGV9 Gene

This gene was present in the common ancestor of mammals.

Orthologs for TRGV9 Gene

Organism Taxonomy Gene Similarity Type Details
oppossum
(Monodelphis domestica)
Mammalia -- 36
  • 28 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia TRGV9 36
  • 36 (a)
OneToOne
Species with no ortholog for TRGV9:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for TRGV9 Gene

ENSEMBL:
Gene Tree for TRGV9 (if available)
TreeFam:
Gene Tree for TRGV9 (if available)

Paralogs for TRGV9 Gene

Paralogs for TRGV9 Gene

genes like me logo Genes that share paralogs with TRGV9: view

Variants for TRGV9 Gene

Relevant External Links for TRGV9 Gene

HapMap Linkage Disequilibrium report
TRGV9

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for TRGV9 Gene

Disorders for TRGV9 Gene

No disorders were found for TRGV9 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for TRGV9 Gene

Publications for TRGV9 Gene

  1. Variable region genes in the human T-cell rearranging gamma (TRG) locus: V-J junction and homology with the mouse genes. (PMID: 2969332) Huck S. … Lefranc M.P. (EMBO J. 1988) 2 3
  2. Functional and structural similarity of V gamma 9V delta 2 T cells in humans and Aotus monkeys, a primate infection model for Plasmodium falciparum malaria. (PMID: 11714808) Daubenberger C.A. … Pluschke G. (J. Immunol. 2001) 3 23
  3. The promoter regions of the T-cell receptor V9 gamma (TRGV9) and V2 delta (TRDV2) genes display short direct repeats but no TATA box. (PMID: 2806544) Dariavach P. … Lefranc M.P. (FEBS Lett. 1989) 2 3
  4. Genetic polymorphism and exon changes of the constant regions of the human T-cell rearranging gene gamma. (PMID: 2879283) Lefranc M.P. … Rabbitts T.H. (Proc. Natl. Acad. Sci. U.S.A. 1986) 3
  5. Structurally divergent human T cell receptor gamma proteins encoded by distinct C gamma genes. (PMID: 2955517) Krangel M.S. … Brenner M.B. (Science 1987) 3

Products for TRGV9 Gene

Sources for TRGV9 Gene

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