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Aliases for TRGV7 Gene

Aliases for TRGV7 Gene

  • T Cell Receptor Gamma Variable 7 (Pseudogene) 2 3 5
  • T-Cell Receptor, Gamma, Variable Region V7 (Pseudogene) 2 3
  • T Cell Receptor Gamma Variable 7 Pseudogene 2
  • T Cell Receptor Gamma Variable 7 2
  • TCRGV7 3
  • V1S7P 3

External Ids for TRGV7 Gene

Previous HGNC Symbols for TRGV7 Gene

  • TCRGV7

Previous GeneCards Identifiers for TRGV7 Gene

  • GC07U990112
  • GC07M038081
  • GC07M038115
  • GC07M038148
  • GC07M038341
  • GC07M038375
  • GC07M038379
  • GC07M038381
  • GC07M038383
  • GC07M038425
  • GC07M038674
  • GC07M038902
  • GC07M039131
  • GC07M039262
  • GC07M038450
  • GC07M038458
  • GC07M038472
  • GC07M038484

Summaries for TRGV7 Gene

GeneCards Summary for TRGV7 Gene

TRGV7 (T Cell Receptor Gamma Variable 7 (Pseudogene)) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRGV7 Gene

Genomics for TRGV7 Gene

Regulatory Elements for TRGV7 Gene

Enhancers for TRGV7 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07F038334 1.3 FANTOM5 ENCODE 0.8 -0.8 -827 3.7 HDGF ATF1 PKNOX1 ARNT CREB3L1 ZNF48 ZNF2 ZNF143 ZNF263 SP3 ENSG00000272908 TRGV5 TRGV5P STARD3NL AMPH TRGV6 TRGV7
GH07F038329 1.4 FANTOM5 Ensembl ENCODE 0.8 +4.4 4434 2.6 PTRF YBX1 RAD21 ZNF143 CREM ELF1 HDAC8 CREB3 MEF2D SMARCA4 ENSG00000272908 STARD3NL TRGV5P TARP TRGV7 TRGV8
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around TRGV7 on UCSC Golden Path with GeneCards custom track

Promoters for TRGV7 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000309756 14 601 HDGF ATF1 PKNOX1 ARNT CREB3L1 ZNF48 ZNF2 ZNF143 ZNF263 SP3

Genomic Location for TRGV7 Gene

Chromosome:
7
Start:
38,335,041 bp from pter
End:
38,335,514 bp from pter
Size:
474 bases
Orientation:
Minus strand

Genomic View for TRGV7 Gene

Genes around TRGV7 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRGV7 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRGV7 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRGV7 Gene

Proteins for TRGV7 Gene

Post-translational modifications for TRGV7 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRGV7 Gene

Domains & Families for TRGV7 Gene

Gene Families for TRGV7 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRGV7: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRGV7 Gene

Function for TRGV7 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRGV7 Gene

Localization for TRGV7 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRGV7 Gene

Pathways & Interactions for TRGV7 Gene

SuperPathways for TRGV7 Gene

No Data Available

Interacting Proteins for TRGV7 Gene

Gene Ontology (GO) - Biological Process for TRGV7 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRGV7 Gene

Transcripts for TRGV7 Gene

mRNA/cDNA for TRGV7 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for TRGV7 Gene

No ASD Table

Relevant External Links for TRGV7 Gene

GeneLoc Exon Structure for
TRGV7
ECgene alternative splicing isoforms for
TRGV7

Expression for TRGV7 Gene

mRNA expression in normal human tissues for TRGV7 Gene

mRNA differential expression in normal tissues according to GTEx for TRGV7 Gene

This gene is overexpressed in Whole Blood (x18.0) and Spleen (x4.6).

NURSA nuclear receptor signaling pathways regulating expression of TRGV7 Gene:

TRGV7
genes like me logo Genes that share expression patterns with TRGV7: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TRGV7 Gene

Orthologs for TRGV7 Gene

Evolution for TRGV7 Gene

ENSEMBL:
Gene Tree for TRGV7 (if available)
TreeFam:
Gene Tree for TRGV7 (if available)

No data available for Orthologs for TRGV7 Gene

Paralogs for TRGV7 Gene

No data available for Paralogs for TRGV7 Gene

Variants for TRGV7 Gene

Relevant External Links for TRGV7 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRGV7

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRGV7 Gene

Disorders for TRGV7 Gene

Relevant External Links for TRGV7

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
TRGV7

No disorders were found for TRGV7 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for TRGV7 Gene

Publications for TRGV7 Gene

  1. Variable region genes in the human T-cell rearranging gamma (TRG) locus: V-J junction and homology with the mouse genes. (PMID: 2969332) Huck S. … Lefranc M.P. (EMBO J. 1988) 2 3 64
  2. Diversity and rearrangement of the human T cell rearranging gamma genes: nine germ-line variable genes belonging to two subgroups. (PMID: 2938743) LeFranc M.P. … Rabbitts T.H. (Cell 1986) 2 3 64
  3. Shifted Transversal Design smart-pooling for high coverage interactome mapping. (PMID: 19447967) Xin X. … Thierry-Mieg N. (Genome Res. 2009) 3 64
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64
  5. The human T-cell receptor gamma (TRG) genes. (PMID: 2527426) Lefranc M.P. … Rabbitts T.H. (Trends Biochem. Sci. 1989) 3 64

Products for TRGV7 Gene

Sources for TRGV7 Gene

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