Free for academic non-profit institutions. Other users need a Commercial license

TRGV6 Gene(Pseudogene)

T Cell Receptor Gamma Variable 6 (Pseudogene)

GCID:
GC07M038476
GIFtS:
10
Genes Participants
UDN Logo

Aliases for TRGV6 Gene

Aliases for TRGV6 Gene

  • T Cell Receptor Gamma Variable 6 (Pseudogene) 2 3 5
  • T Cell Receptor Gamma Variable 6 Pseudogene 2 3
  • T-Cell Receptor, Gamma, Variable Region V5P (Pseudogene) 3
  • T-Cell Receptor, Gamma, Variable Region V6 (Pseudogene) 3
  • Variable Region V5P (Pseudogene) 2
  • T Cell Receptor Gamma Variable 6 2
  • T-Cell Receptor 2
  • TCRGV5P 3
  • TCRGV6 3
  • Gamma 2
  • V1S5P 3
  • V1S6P 3

External Ids for TRGV6 Gene

Previous HGNC Symbols for TRGV6 Gene

  • TCRGV6

Previous GeneCards Identifiers for TRGV6 Gene

  • GC07U990111
  • GC07M038087
  • GC07M038121
  • GC07M038153
  • GC07M038346
  • GC07M038380
  • GC07M038264
  • GC07M038439
  • GC07M038462

Summaries for TRGV6 Gene

GeneCards Summary for TRGV6 Gene

TRGV6 (T Cell Receptor Gamma Variable 6 (Pseudogene)) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRGV6 Gene

Genomics for TRGV6 Gene

Products:

  1. Regulatory Element

Regulatory Elements for TRGV6 Gene

Enhancers for TRGV6 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around TRGV6 on UCSC Golden Path with GeneCards custom track

Promoters for TRGV6 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around TRGV6 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRGV6 Gene

Chromosome:
7
Start:
38,340,700 bp from pter
End:
38,341,171 bp from pter
Size:
472 bases
Orientation:
Minus strand

Genomic View for TRGV6 Gene

Genes around TRGV6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRGV6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRGV6 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for TRGV6 Gene

Proteins for TRGV6 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for TRGV6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRGV6 Gene

Domains & Families for TRGV6 Gene

Gene Families for TRGV6 Gene

HGNC:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRGV6: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRGV6 Gene

Function for TRGV6 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRGV6 Gene

Localization for TRGV6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRGV6 Gene

Pathways & Interactions for TRGV6 Gene

SuperPathways for TRGV6 Gene

PathCards logoMore details on SuperPathways for TRGV6
No Data Available

Interacting Proteins for TRGV6 Gene

Gene Ontology (GO) - Biological Process for TRGV6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRGV6 Gene

Drugs & Compounds for TRGV6 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for TRGV6 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for TRGV6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TRGV6 Gene

No ASD Table

Relevant External Links for TRGV6 Gene

GeneLoc Exon Structure for
TRGV6
ECgene alternative splicing isoforms for
TRGV6

Expression for TRGV6 Gene

Products:

  1. Primer

mRNA expression in normal human tissues for TRGV6 Gene

mRNA expression in normal human tissues for TRGV6 Gene
mRNA expression by GTEx for TRGV6 Gene

mRNA differential expression in normal tissues according to GTEx for TRGV6 Gene

This gene is overexpressed in Testis (x18.2), Prostate (x8.1), Spleen (x6.8), Whole Blood (x5.4), and Lung (x4.0).
genes like me logo Genes that share expression patterns with TRGV6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for TRGV6 Gene

Orthologs for TRGV6 Gene

Evolution for TRGV6 Gene

ENSEMBL:
Gene Tree for TRGV6 (if available)
TreeFam:
Gene Tree for TRGV6 (if available)

No data available for Orthologs for TRGV6 Gene

Paralogs for TRGV6 Gene

No data available for Paralogs for TRGV6 Gene

Variants for TRGV6 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for TRGV6 Gene

Disorders for TRGV6 Gene

No disorders were found for TRGV6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRGV6 Gene

Publications for TRGV6 Gene

  1. Variable region genes in the human T-cell rearranging gamma (TRG) locus: V-J junction and homology with the mouse genes. (PMID: 2969332) Huck S. … Lefranc M.P. (EMBO J. 1988) 2 3 67
  2. Diversity and rearrangement of the human T cell rearranging gamma genes: nine germ-line variable genes belonging to two subgroups. (PMID: 2938743) LeFranc M.P. … Rabbitts T.H. (Cell 1986) 2 3
  3. The human T-cell receptor gamma (TRG) genes. (PMID: 2527426) Lefranc M.P. … Rabbitts T.H. (Trends Biochem. Sci. 1989) 3

Products for TRGV6 Gene

Sources for TRGV6 Gene

Content