Aliases for TRGV6 Gene
Aliases for TRGV6 Gene
External Ids for TRGV6 Gene
- HGNC: 12292
- Entrez Gene: 6980
- Ensembl: ENSG00000226212
Previous HGNC Symbols for TRGV6 Gene
- TCRGV6
Previous GeneCards Identifiers for TRGV6 Gene
- GC07U990111
- GC07M038087
- GC07M038121
- GC07M038153
- GC07M038346
- GC07M038380
- GC07M038264
- GC07M038439
- GC07M038462
- GC07M038476
- GC07M038488
- GC07M038501
Summaries for TRGV6 Gene
GeneCards Summary for TRGV6 Gene
TRGV6 (T-Cell Receptor Gamma Variable 6 (Pseudogene)) is a Pseudogene.
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRGV6 Gene
Genomics for TRGV6 Gene
Regulatory Elements for TRGV6 Gene
Enhancers for TRGV6 Gene
| GeneHancer Identifier | Enhancer Score | Enhancer Sources | Gene-Enhancer Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites within enhancer | Gene Targets for Enhancer |
|---|---|---|---|---|---|---|---|---|
| GH07G038344 | 1.3 | Ensembl ENCODE dbSUPER | 5.8 | -4.3 | -4340 | 3.0 | HDGF CTCF NFXL1 RAD21 TCF12 GATA2 EGR1 ZNF366 ZBTB48 EED | TRGV4 TRGV5P TRGV3 AMPH TRGV6 TRGV5 |
| GH07G038334 | 1.8 | FANTOM5 Ensembl ENCODE dbSUPER | 0.7 | +4.8 | 4831 | 3.7 | HDGF PKNOX1 CREB3L1 ARNT ZNF2 ZNF143 KLF13 ZNF263 SP3 JUNB | ENSG00000272908 TRGV5 TRGV5P STARD3NL AMPH TRGV6 TRGV7 |
| GH07G038340 | 1.5 | Ensembl ENCODE dbSUPER | 0.7 | -0.4 | -400 | 3.3 | HDGF PKNOX1 ATF1 CREB3L1 ARNT FOS KLF13 ZNF263 NCOA1 REST | TRGV4 TRGV3 TRGV5P TRG-AS1 TRGV6 |
| GH07G038339 | 0.4 | Ensembl | 0.7 | +1.6 | 1571 | 0.4 | PKNOX1 ZNF512 | TRGV6 TRGV7 |
| GH07G038338 | 0.4 | dbSUPER | 0.7 | +2.6 | 2563 | 0.7 | CEBPB CEBPG | TRGV5P TRGV5 TRGV4 TRGV6 TRGV7 |
- Elite enhancer and/or Elite enhancer-gene association
Download GeneHancer data dump
Enhancers around TRGV6 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Location for TRGV6 Gene
- Chromosome:
- 7
- Start:
- 38,340,700 bp from pter
- End:
- 38,341,171 bp from pter
- Size:
- 472 bases
- Orientation:
- Minus strand
Genomic View for TRGV6 Gene
Genes around TRGV6 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 7p14.1 by Ensembl
- 7p14.1 by Entrez Gene
- 7p14.1 by HGNC
TRGV6 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for TRGV6 Gene
Proteins for TRGV6 Gene
Post-translational modifications for TRGV6 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for TRGV6
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for TRGV6
- Origene Custom Protein Services for TRGV6
- Search GeneTex for Proteins for TRGV6
No data available for DME Specific Peptides for TRGV6 Gene
Domains & Families for TRGV6 Gene
Gene Families for TRGV6 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRGV6 Gene
Function for TRGV6 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for TRGV6
-
- Search ViGene Biosciences for TRGV6
CRISPR Products
- Browse CRISPR knockouts for TRGV6
miRNA Products
- Search ViGene Biosciences for TRGV6
Inhibitory RNA Products
- Search ViGene Biosciences for TRGV6
Clone Products
- GenScript: Custom all cDNA clones Services for TRGV6
- VectorBuilder custom plasmid, inducible vectors for TRGV6
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for TRGV6
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRGV6 Gene
Localization for TRGV6 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRGV6 Gene
Transcripts for TRGV6 Gene
mRNA/cDNA for TRGV6 Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
- Browse CRISPR knockouts for TRGV6
miRNA Products
- Search ViGene Biosciences for TRGV6
Inhibitory RNA Products
- Search ViGene Biosciences for TRGV6
Clone Products
- GenScript: Custom all cDNA clones Services for TRGV6
- VectorBuilder custom plasmid, inducible vectors for TRGV6
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for TRGV6
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Expression for TRGV6 Gene
mRNA differential expression in normal tissues according to GTEx for TRGV6 Gene
This gene is overexpressed in Testis (x18.2), Prostate (x8.1), Spleen (x6.8), Whole Blood (x5.4), and Lung (x4.0).
NURSA nuclear receptor signaling pathways regulating expression of TRGV6 Gene:
TRGV6Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRGV6 Gene
Orthologs for TRGV6 Gene
No data available for Orthologs for TRGV6 Gene
Paralogs for TRGV6 Gene
No data available for Paralogs for TRGV6 Gene
Variants for TRGV6 Gene
Relevant External Links for TRGV6 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- TRGV6
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRGV6 Gene
Disorders for TRGV6 Gene
No disorders were found for TRGV6 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRGV6 Gene
Publications for TRGV6 Gene
- Variable region genes in the human T-cell rearranging gamma (TRG) locus: V-J junction and homology with the mouse genes. (PMID: 2969332) Huck S. … Lefranc M.P. (EMBO J. 1988) 2 3 64
- Diversity and rearrangement of the human T cell rearranging gamma genes: nine germ-line variable genes belonging to two subgroups. (PMID: 2938743) LeFranc M.P. … Rabbitts T.H. (Cell 1986) 2 3 64
- The human T-cell receptor gamma (TRG) genes. (PMID: 2527426) Lefranc M.P. … Rabbitts T.H. (Trends Biochem. Sci. 1989) 3 64
Products for TRGV6 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
- Browse Flow Cytometry Kits
- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for TRGV6
- Origene Custom Protein Services for TRGV6
- Browse OriGene Inhibitory RNA Products For TRGV6
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for TRGV6
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For TRGV6
- GenScript: Custom all cDNA clones Services for TRGV6
- GenScript Custom Purified and Recombinant Proteins Services for TRGV6
- GenScript Custom Assay Services for TRGV6
- GenScript Custom overexpressing Cell Line Services for TRGV6
- Browse GenScript CRISPR for TRGV6
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
- GenScript Custom Peptide Services for TRGV6
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Proteins
- Sino Biological Antibodies
- Sino Biological ELISA Kits and Pair Sets
- Sino Biological Cell Lysates
- Sino Biological qPCR Primers
- Sino Biological CRO Services for Proteins, Antibodies and Genes
- Sino Biological Transfection Reagents
- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Search GeneTex for Antibodies for TRGV6
- Search GeneTex for Proteins for TRGV6
- Search ViGene Biosciences for TRGV6
- Cyagen custom Knockout/knockin (KOKI) mouse models for TRGV6
- VectorBuilder custom plasmid, inducible vectors for TRGV6
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for TRGV6
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Sources for TRGV6 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) RNAdb
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) GeneTests
- (45) HGMD
- (46) GAD
- (47) LSDB
- (48) BGMUT
- (49) HuGE
- (50) eBioscience
- (51) Atlas
- (52) Cell Signaling Technology
- (53) GenBank
- (54) H-invDB
- (55) HORDE
- (56) HUGE
- (57) IMGT
- (58) Leiden
- (59) MILLIPORE
- (60) miRBase
- (61) DME
- (62) NCBI
- (63) OriGene
- (64) PubMed
- (65) R&D Systems
- (66) TGDB
- (67) Tocris
- (68) Abcam
- (69) Novus
- (70) ProSpec
- (71) Sino Biological
- (72) GenScript
- (73) Qiagen
- (74) Cloud-Clone Corp.
- (75) Enzo Life Sciences
- (76) OCA
- (77) Proteopedia
- (78) MOPED
- (79) SPIRE
- (80) neXtProt
- (81) Reactome
- (82) GeneGo (Thomson Reuters)
- (83) fRNAdb
- (84) DISEASES
- (85) SIMAP
- (86) GenomeRNAi
- (87) LifeMap
- (88) miRTarBase
- (89) MalaCards
- (90) Invitrogen
- (91) BitterDB
- (92) Vector BioLabs
- (93) ESI-BIO
- (94) RefSeq
- (95) BioSystems
- (96) MaxQB
- (97) IUPHAR
- (98) BioGPS
- (99) Illumina
- (100) COMPARTMENTS
- (101) HOMER
- (102) PaxDb
- (103) ApexBio
- (104) Addgene
- (105) antibodies-online
- (106) CYP
- (107) NONCODE
- (108) SwitchGear Genomics
- (109) TreeFam
- (110) PathCards
- (111) GeneReviews
- (112) GeneTex
- (113) Taconic Biosciences
- (114) GTEx
- (115) ProteomicsDB
- (116) SCBT
- (117) DGIdb
- (118) ClinicalTrials
- (119) FDA Approved Drugs
- (120) RVIS
- (121) SIGNOR
- (122) diseasecard
- (123) NIH Rare Diseases
- (124) Orphanet
- (125) UMLS
- (126) GTR
- (127) Disease Ontology
- (128) Genetics Home Reference
- (129) MeSH
- (130) MedlinePlus
- (131) CDC
- (132) NINDS
- (133) NCBI Bookshelf
- (134) ClinVar
- (135) Gene Damage Index
- (136) ViGene Biosciences
- (137) HPO
- (138) UDN
- (139) VISTA
- (140) FANTOM5
- (141) ENCODE
- (142) ProSci
- (143) Horizon
- (144) NURSA
- (145) IID
- (146) Cyagen
- (147) VectorBuilder
- (148) SNPedia
- (149) BRCA Exchange
- (150) St John's Lab
- (151) CIViC
- (152) ProteoGenix
- (153) dbSUPER
- (154) TISSUES
- (155) Gene ORGANizer