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Aliases for TRGV2 Gene

Aliases for TRGV2 Gene

  • T Cell Receptor Gamma Variable 2 2 3
  • T-Cell Receptor, Gamma, Variable Region V2 3
  • Variable Region V2 2
  • T-Cell Receptor 2
  • TCRGV2 3
  • Gamma 2
  • VIS2 3

External Ids for TRGV2 Gene

Previous HGNC Symbols for TRGV2 Gene

  • TCRGV2

Previous GeneCards Identifiers for TRGV2 Gene

  • GC07U990106
  • GC07M038109
  • GC07M038143
  • GC07M038175
  • GC07M038369
  • GC07M038403
  • GC07M038440
  • GC07M038405
  • GC07M038406
  • GC07M038432
  • GC07M038677
  • GC07M038905
  • GC07M039134
  • GC07M039365

Summaries for TRGV2 Gene

GeneCards Summary for TRGV2 Gene

TRGV2 (T Cell Receptor Gamma Variable 2) is a Protein Coding gene. An important paralog of this gene is TRGV3.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRGV2 Gene

Genomics for TRGV2 Gene

Genomic Location for TRGV2 Gene

Start:
38,362,864 bp from pter
End:
38,363,518 bp from pter
Size:
655 bases
Orientation:
Minus strand

Genomic View for TRGV2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TRGV2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRGV2 Gene

No data available for Regulatory Elements for TRGV2 Gene

Proteins for TRGV2 Gene

  • Protein details for TRGV2 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A075B6R0
    Recommended name:
    Protein TRGV2
    Protein Accession:
    A0A075B6R0
    Secondary Accessions:

    Protein attributes for TRGV2 Gene

    Size:
    118 amino acids
    Molecular mass:
    13310 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TRGV2 Gene

Proteomics data for TRGV2 Gene at MOPED

Post-translational modifications for TRGV2 Gene

No Post-translational modifications

Other Protein References for TRGV2 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for TRGV2 Gene

Domains for TRGV2 Gene

Gene Families for TRGV2 Gene

HGNC:
  • TRG :T cell receptors / TRG locus

Protein Domains for TRGV2 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRGV2: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRGV2 Gene

Function for TRGV2 Gene

Gene Ontology (GO) - Molecular Function for TRGV2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding --
genes like me logo Genes that share ontologies with TRGV2: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for TRGV2 Gene

Localization for TRGV2 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for TRGV2 Gene COMPARTMENTS Subcellular localization image for TRGV2 gene
Compartment Confidence
extracellular 3

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for TRGV2 Gene

Pathways for TRGV2 Gene

SuperPathways for TRGV2 Gene

No Data Available

Interacting Proteins for TRGV2 Gene

Gene Ontology (GO) - Biological Process for TRGV2 Gene

None

No data available for Pathways by source for TRGV2 Gene

Transcripts for TRGV2 Gene

mRNA/cDNA for TRGV2 Gene

(359) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TRGV2 Gene

No ASD Table

Relevant External Links for TRGV2 Gene

GeneLoc Exon Structure for
TRGV2
ECgene alternative splicing isoforms for
TRGV2

Expression for TRGV2 Gene

mRNA expression in normal human tissues for TRGV2 Gene

mRNA differential expression in normal tissues according to GTEx for TRGV2 Gene

This gene is overexpressed in Whole Blood (16.9), Spleen (8.7), and Small Intestine - Terminal Ileum (4.5).
genes like me logo Genes that share expressions with TRGV2: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for TRGV2 Gene

Orthologs for TRGV2 Gene

This gene was present in the common ancestor of mammals.

Orthologs for TRGV2 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia -- 36
  • 52 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 36
  • 35 (a)
ManyToMany
-- 36
  • 43 (a)
ManyToMany
-- 36
  • 24 (a)
ManyToMany
-- 36
  • 32 (a)
ManyToMany
-- 36
  • 35 (a)
ManyToMany
-- 36
  • 35 (a)
ManyToMany
-- 36
  • 40 (a)
ManyToMany
-- 36
  • 41 (a)
ManyToMany
Species with no ortholog for TRGV2:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for TRGV2 Gene

ENSEMBL:
Gene Tree for TRGV2 (if available)
TreeFam:
Gene Tree for TRGV2 (if available)

Paralogs for TRGV2 Gene

Paralogs for TRGV2 Gene

genes like me logo Genes that share paralogs with TRGV2: view

Variants for TRGV2 Gene

Relevant External Links for TRGV2 Gene

HapMap Linkage Disequilibrium report
TRGV2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for TRGV2 Gene

Disorders for TRGV2 Gene

No disorders were found for TRGV2 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for TRGV2 Gene

Publications for TRGV2 Gene

  1. Diversity and rearrangement of the human T cell rearranging gamma genes: nine germ-line variable genes belonging to two subgroups. (PMID: 2938743) LeFranc M.P. … Rabbitts T.H. (Cell 1986) 2 3
  2. Variable region genes in the human T-cell rearranging gamma (TRG) locus: V-J junction and homology with the mouse genes. (PMID: 2969332) Huck S. … Lefranc M.P. (EMBO J. 1988) 2 3
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  4. The human T-cell receptor gamma (TRG) genes. (PMID: 2527426) Lefranc M.P. … Rabbitts T.H. (Trends Biochem. Sci. 1989) 3

Products for TRGV2 Gene

Sources for TRGV2 Gene

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