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Aliases for TRGV10 Gene

Aliases for TRGV10 Gene

  • T Cell Receptor Gamma Variable 10 (Non-Functional) 2 3
  • T Cell Receptor Gamma Variable 10 Pseudogene 3
  • T-Cell Receptor, Gamma, Variable Region V10 3
  • T Cell Receptor Gamma Variable 10 2
  • Variable Region V10 2
  • T-Cell Receptor 2
  • TCRGV10 3
  • Gamma 2
  • V3P 3

External Ids for TRGV10 Gene

Previous HGNC Symbols for TRGV10 Gene

  • TCRGV10

Previous GeneCards Identifiers for TRGV10 Gene

  • GC07U990115
  • GC07M038046
  • GC07M038080
  • GC07M038112
  • GC07M038305
  • GC07M038340
  • GC07M038378
  • GC07M038350
  • GC07M038367
  • GC07M038424
  • GC07M038673
  • GC07M038901
  • GC07M039130
  • GC07M039187

Summaries for TRGV10 Gene

GeneCards Summary for TRGV10 Gene

TRGV10 (T Cell Receptor Gamma Variable 10 (Non-Functional)) is a Pseudogene. An important paralog of this gene is TRGV11.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRGV10 Gene

Genomics for TRGV10 Gene

Genomic Location for TRGV10 Gene

Start:
38,299,810 bp from pter
End:
38,300,322 bp from pter
Size:
513 bases
Orientation:
Minus strand

Genomic View for TRGV10 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TRGV10 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRGV10 Gene

No data available for Regulatory Elements for TRGV10 Gene

Proteins for TRGV10 Gene

  • Protein details for TRGV10 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A0A0MS01
    Recommended name:
    Protein TRGV10
    Protein Accession:
    A0A0A0MS01
    Secondary Accessions:

    Protein attributes for TRGV10 Gene

    Size:
    117 amino acids
    Molecular mass:
    13213 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TRGV10 Gene

Proteomics data for TRGV10 Gene at MOPED

Post-translational modifications for TRGV10 Gene

No Post-translational modifications

Other Protein References for TRGV10 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for TRGV10 Gene

Domains for TRGV10 Gene

Gene Families for TRGV10 Gene

HGNC:
  • TRG :T cell receptors / TRG locus

Protein Domains for TRGV10 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRGV10: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRGV10 Gene

Function for TRGV10 Gene

Gene Ontology (GO) - Molecular Function for TRGV10 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding --
genes like me logo Genes that share ontologies with TRGV10: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for TRGV10 Gene

Localization for TRGV10 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for TRGV10 Gene COMPARTMENTS Subcellular localization image for TRGV10 gene
Compartment Confidence
extracellular 3
cytosol 1
mitochondrion 1
nucleus 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for TRGV10 Gene

Pathways for TRGV10 Gene

SuperPathways for TRGV10 Gene

No Data Available

Interacting Proteins for TRGV10 Gene

Gene Ontology (GO) - Biological Process for TRGV10 Gene

None

No data available for Pathways by source for TRGV10 Gene

Transcripts for TRGV10 Gene

mRNA/cDNA for TRGV10 Gene

(359) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for TRGV10 Gene

No ASD Table

Relevant External Links for TRGV10 Gene

GeneLoc Exon Structure for
TRGV10
ECgene alternative splicing isoforms for
TRGV10

Expression for TRGV10 Gene

mRNA expression in normal human tissues for TRGV10 Gene

mRNA differential expression in normal tissues according to GTEx for TRGV10 Gene

This gene is overexpressed in Whole Blood (28.2) and Spleen (4.9).
genes like me logo Genes that share expressions with TRGV10: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for TRGV10 Gene

Orthologs for TRGV10 Gene

This gene was present in the common ancestor of mammals.

Orthologs for TRGV10 Gene

Organism Taxonomy Gene Similarity Type Details
oppossum
(Monodelphis domestica)
Mammalia -- 36
  • 31 (a)
ManyToMany
-- 36
  • 33 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 36
  • 32 (a)
ManyToMany
-- 36
  • 35 (a)
ManyToMany
Species with no ortholog for TRGV10:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for TRGV10 Gene

ENSEMBL:
Gene Tree for TRGV10 (if available)
TreeFam:
Gene Tree for TRGV10 (if available)

Paralogs for TRGV10 Gene

Paralogs for TRGV10 Gene

genes like me logo Genes that share paralogs with TRGV10: view

Variants for TRGV10 Gene

Relevant External Links for TRGV10 Gene

HapMap Linkage Disequilibrium report
TRGV10

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for TRGV10 Gene

Disorders for TRGV10 Gene

No disorders were found for TRGV10 Gene.

No data available for UniProtKB/Swiss-Prot for TRGV10 Gene

Publications for TRGV10 Gene

  1. Variable region genes in the human T-cell rearranging gamma (TRG) locus: V-J junction and homology with the mouse genes. (PMID: 2969332) Huck S. … Lefranc M.P. (EMBO J. 1988) 2 3
  2. T cell receptor gamma cDNA in human fetal liver and thymus: variable regions of gamma chains are restricted to V gamma I or V9, due to the absence of splicing of the V10 and V11 leader intron. (PMID: 8125127) Zhang X.M. … Huck S. (Eur. J. Immunol. 1994) 23
  3. The human T-cell receptor gamma (TRG) genes. (PMID: 2527426) Lefranc M.P. … Rabbitts T.H. (Trends Biochem. Sci. 1989) 3

Products for TRGV10 Gene

Sources for TRGV10 Gene

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