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Aliases for TRGJP1 Gene

Aliases for TRGJP1 Gene

  • T Cell Receptor Gamma Joining P1 2 3 5
  • T-Cell Receptor Gamma Joining Segment JP1 2 3
  • T-Cell Receptor Gamma Joining P1 2
  • TCRGJP1 3
  • JP1 3

External Ids for TRGJP1 Gene

Previous HGNC Symbols for TRGJP1 Gene

  • TCRGJP1

Previous GeneCards Identifiers for TRGJP1 Gene

  • GC07U990103
  • GC07M038022
  • GC07M038056
  • GC07M038089
  • GC07M038282
  • GC07M038316
  • GC07M038321
  • GC07M038326
  • GC07M038387
  • GC07M038427
  • GC07M038535
  • GC07M038794
  • GC07M038949
  • GC07M039183

Summaries for TRGJP1 Gene

GeneCards Summary for TRGJP1 Gene

TRGJP1 (T Cell Receptor Gamma Joining P1) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRGJP1 Gene

Genomics for TRGJP1 Gene

Regulatory Elements for TRGJP1 Gene

Enhancers for TRGJP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07F038275 0.6 ENCODE 0.8 -0.2 -249 1.5 IKZF1 TRGC2 TRGJ2 GC07P038279 TRGJP1
GH07F038272 0.2 ENCODE 0.8 +2.3 2332 2.6 BCOR ZMYM3 HDAC2 ATF3 ADNP IKZF1 KDM1A IRF1 TRGC2 TRGJP TRGJP1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around TRGJP1 on UCSC Golden Path with GeneCards custom track

Promoters for TRGJP1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001891044 1218 2201 BCOR ATF3 HDAC2 ADNP ZMYM3 KDM1A

Genomic Location for TRGJP1 Gene

Chromosome:
7
Start:
38,276,259 bp from pter
End:
38,276,318 bp from pter
Size:
60 bases
Orientation:
Minus strand

Genomic View for TRGJP1 Gene

Genes around TRGJP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRGJP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRGJP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRGJP1 Gene

Proteins for TRGJP1 Gene

  • Protein details for TRGJP1 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A0A0MT97
    Recommended name:
    Protein TRGJP1
    Protein Accession:
    A0A0A0MT97

    Protein attributes for TRGJP1 Gene

    Size:
    20 amino acids
    Molecular mass:
    2208 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TRGJP1 Gene

Post-translational modifications for TRGJP1 Gene

No Post-translational modifications

Other Protein References for TRGJP1 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for TRGJP1 Gene

Domains & Families for TRGJP1 Gene

Gene Families for TRGJP1 Gene

Protein Domains for TRGJP1 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRGJP1: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRGJP1 Gene

Function for TRGJP1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRGJP1 Gene

Localization for TRGJP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRGJP1 Gene

Pathways & Interactions for TRGJP1 Gene

SuperPathways for TRGJP1 Gene

No Data Available

Interacting Proteins for TRGJP1 Gene

Gene Ontology (GO) - Biological Process for TRGJP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRGJP1 Gene

Transcripts for TRGJP1 Gene

mRNA/cDNA for TRGJP1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for TRGJP1 Gene

No ASD Table

Relevant External Links for TRGJP1 Gene

GeneLoc Exon Structure for
TRGJP1
ECgene alternative splicing isoforms for
TRGJP1

Expression for TRGJP1 Gene

mRNA expression in normal human tissues for TRGJP1 Gene

mRNA differential expression in normal tissues according to GTEx for TRGJP1 Gene

This gene is overexpressed in Whole Blood (x26.1).

NURSA nuclear receptor signaling pathways regulating expression of TRGJP1 Gene:

TRGJP1
genes like me logo Genes that share expression patterns with TRGJP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TRGJP1 Gene

Orthologs for TRGJP1 Gene

Evolution for TRGJP1 Gene

ENSEMBL:
Gene Tree for TRGJP1 (if available)
TreeFam:
Gene Tree for TRGJP1 (if available)

No data available for Orthologs for TRGJP1 Gene

Paralogs for TRGJP1 Gene

No data available for Paralogs for TRGJP1 Gene

Variants for TRGJP1 Gene

Relevant External Links for TRGJP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRGJP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRGJP1 Gene

Disorders for TRGJP1 Gene

No disorders were found for TRGJP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRGJP1 Gene

Publications for TRGJP1 Gene

  1. The human T-cell receptor gamma (TRG) genes. (PMID: 2527426) Lefranc M.P. … Rabbitts T.H. (Trends Biochem. Sci. 1989) 3 64
  2. Variable region genes in the human T-cell rearranging gamma (TRG) locus: V-J junction and homology with the mouse genes. (PMID: 2969332) Huck S. … Lefranc M.P. (EMBO J. 1988) 2 64
  3. Rearrangements to the JP1, JP and JP2 segments in the human T-cell rearranging gamma gene (TRG gamma) locus. (PMID: 2961609) Huck S. … Lefranc M.P. (FEBS Lett. 1987) 3 64

Products for TRGJP1 Gene

Sources for TRGJP1 Gene

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