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Aliases for TRGJ1 Gene

Aliases for TRGJ1 Gene

  • T-Cell Receptor Gamma Joining 1 2 5
  • T-Cell Receptor, Gamma, Joining Segment J1 2 3
  • T Cell Receptor Gamma Joining 1 2 3
  • TCRGJ1 3
  • J1 3

External Ids for TRGJ1 Gene

Previous HGNC Symbols for TRGJ1 Gene

  • TCRGJ1

Previous GeneCards Identifiers for TRGJ1 Gene

  • GC07U990100
  • GC07M038015
  • GC07M038049
  • GC07M038082
  • GC07M038275
  • GC07M038310
  • GC07M038312
  • GC07M038322
  • GC07M038353
  • GC07M038415
  • GC07M038443
  • GC07M038717
  • GC07M038947
  • GC07M039181

Summaries for TRGJ1 Gene

GeneCards Summary for TRGJ1 Gene

TRGJ1 (T-Cell Receptor Gamma Joining 1) is a Protein Coding gene. An important paralog of this gene is TRGJ2.

Additional gene information for TRGJ1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRGJ1 Gene

Genomics for TRGJ1 Gene

Regulatory Elements for TRGJ1 Gene

Enhancers for TRGJ1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07H038268 0.2 dbSUPER 0.7 +0.5 486 0 TRGC1 TRGJ1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRGJ1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRGJ1 Gene

Chromosome:
7
Start:
38,269,491 bp from pter
End:
38,269,540 bp from pter
Size:
50 bases
Orientation:
Minus strand

Genomic View for TRGJ1 Gene

Genes around TRGJ1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRGJ1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRGJ1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRGJ1 Gene

Proteins for TRGJ1 Gene

  • Protein details for TRGJ1 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A075B6S0
    Recommended name:
    T-cell receptor gamma joining 1
    Protein Accession:
    A0A075B6S0

    Protein attributes for TRGJ1 Gene

    Size:
    17 amino acids
    Molecular mass:
    1902 Da
    Quaternary structure:
    No Data Available

neXtProt entry for TRGJ1 Gene

Post-translational modifications for TRGJ1 Gene

No Post-translational modifications

Other Protein References for TRGJ1 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for TRGJ1 Gene

Domains & Families for TRGJ1 Gene

Gene Families for TRGJ1 Gene

Protein Domains for TRGJ1 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRGJ1: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRGJ1 Gene

Function for TRGJ1 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TRGJ1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRGJ1 Gene

Localization for TRGJ1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRGJ1 Gene

Pathways & Interactions for TRGJ1 Gene

SuperPathways for TRGJ1 Gene

No Data Available

Interacting Proteins for TRGJ1 Gene

Gene Ontology (GO) - Biological Process for TRGJ1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRGJ1 Gene

Drugs & Compounds for TRGJ1 Gene

No Compound Related Data Available

Transcripts for TRGJ1 Gene

mRNA/cDNA for TRGJ1 Gene

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TRGJ1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for TRGJ1 Gene

No ASD Table

Relevant External Links for TRGJ1 Gene

GeneLoc Exon Structure for
TRGJ1
ECgene alternative splicing isoforms for
TRGJ1

Expression for TRGJ1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for TRGJ1 Gene

mRNA differential expression in normal tissues according to GTEx for TRGJ1 Gene

This gene is overexpressed in Whole Blood (x26.4), Prostate (x15.2), and Spleen (x4.4).

NURSA nuclear receptor signaling pathways regulating expression of TRGJ1 Gene:

TRGJ1
genes like me logo Genes that share expression patterns with TRGJ1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRGJ1 Gene

Orthologs for TRGJ1 Gene

Evolution for TRGJ1 Gene

ENSEMBL:
Gene Tree for TRGJ1 (if available)
TreeFam:
Gene Tree for TRGJ1 (if available)

No data available for Orthologs for TRGJ1 Gene

Paralogs for TRGJ1 Gene

Paralogs for TRGJ1 Gene

genes like me logo Genes that share paralogs with TRGJ1: view

Variants for TRGJ1 Gene

Relevant External Links for TRGJ1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRGJ1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRGJ1 Gene

Disorders for TRGJ1 Gene

No disorders were found for TRGJ1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRGJ1 Gene

Publications for TRGJ1 Gene

  1. Rearrangement of two distinct T-cell gamma-chain variable-region genes in human DNA. (PMID: 3003579) Lefranc MP … Rabbitts TH (Nature 1986) 2 3 60
  2. The human T-cell receptor gamma (TRG) genes. (PMID: 2527426) Lefranc MP … Rabbitts TH (Trends in biochemical sciences 1989) 3 60

Products for TRGJ1 Gene

Sources for TRGJ1 Gene

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