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Aliases for TRGC1 Gene

Aliases for TRGC1 Gene

  • T Cell Receptor Gamma Constant 1 2 3
  • T-Cell Receptor, Gamma, Constant Region C1 3
  • Constant Region C1 2
  • T-Cell Receptor 2
  • TCRGC1 3
  • Gamma 2
  • TCRG 3
  • C1 3

External Ids for TRGC1 Gene

Previous Symbols for TRGC1 Gene

  • TCRGC1

Summaries for TRGC1 Gene

GeneCards Summary for TRGC1 Gene

TRGC1 (T Cell Receptor Gamma Constant 1) is a Protein Coding gene. An important paralog of this gene is TRGC2.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRGC1 Gene

Genomics for TRGC1 Gene

Genomic Location for TRGC1 Gene

Start:
38,257,879 bp from pter
End:
38,330,821 bp from pter
Size:
72,943 bases
Orientation:
Minus strand

Genomic View for TRGC1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for TRGC1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRGC1 Gene

No data available for Regulatory Elements for TRGC1 Gene

Proteins for TRGC1 Gene

  • Protein details for TRGC1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P0CF51-TRGC1_HUMAN
    Recommended name:
    T-cell receptor gamma chain C region 1
    Protein Accession:
    P0CF51
    Secondary Accessions:

    Protein attributes for TRGC1 Gene

    Size:
    173 amino acids
    Molecular mass:
    19804 Da
    Quaternary structure:
    No Data Available

    Three dimensional structures from OCA and Proteopedia for TRGC1 Gene

neXtProt entry for TRGC1 Gene

Proteomics data for TRGC1 Gene at MOPED

Post-translational modifications for TRGC1 Gene

No Post-translational modifications

Other Protein References for TRGC1 Gene

No data available for DME Specific Peptides for TRGC1 Gene

Domains for TRGC1 Gene

Gene Families for TRGC1 Gene

HGNC:
  • TRG :T cell receptors / TRG locus

Protein Domains for TRGC1 Gene

UniProtKB/Swiss-Prot:

TRGC1_HUMAN
Domain:
  • Contains 1 Ig-like (immunoglobulin-like) domain.:
    • P0CF51
genes like me logo Genes that share domains with TRGC1: view

Function for TRGC1 Gene

Gene Ontology (GO) - Molecular Function for TRGC1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding --
genes like me logo Genes that share ontologies with TRGC1: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for TRGC1 Gene

Localization for TRGC1 Gene

Subcellular locations from UniProtKB/Swiss-Prot for TRGC1 Gene

Membrane; Single-pass membrane protein.

Gene Ontology (GO) - Cellular Components for TRGC1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with TRGC1: view

Pathways for TRGC1 Gene

SuperPathways for TRGC1 Gene

No Data Available

Interacting Proteins for TRGC1 Gene

Gene Ontology (GO) - Biological Process for TRGC1 Gene

None

No data available for Pathways by source for TRGC1 Gene

Transcripts for TRGC1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for TRGC1 Gene

No ASD Table

Relevant External Links for TRGC1 Gene

GeneLoc Exon Structure for
TRGC1
ECgene alternative splicing isoforms for
TRGC1

Expression for TRGC1 Gene

mRNA expression in normal human tissues for TRGC1 Gene

mRNA differential expression in normal tissues according to GTEx for TRGC1 Gene

This gene is overexpressed in Prostate (26.6) and Whole Blood (11.1).
genes like me logo Genes that share expressions with TRGC1: view

Orthologs for TRGC1 Gene

This gene was present in the common ancestor of chordates.

Orthologs for TRGC1 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia -- 37
  • 54 (a)
ManyToMany
-- 37
  • 30 (a)
ManyToMany
-- 37
  • 29 (a)
ManyToMany
-- 37
  • 30 (a)
ManyToMany
-- 37
  • 31 (a)
ManyToMany
dog
(Canis familiaris)
Mammalia -- 37
  • 49 (a)
ManyToMany
-- 37
  • 39 (a)
ManyToMany
-- 37
  • 43 (a)
ManyToMany
-- 37
  • 36 (a)
ManyToMany
-- 37
  • 29 (a)
ManyToMany
-- 37
  • 52 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Tcrg-C1 37
  • 69 (a)
ManyToMany
Tcrg-C2 37
  • 68 (a)
ManyToMany
Tcrg-C3 37
  • 69 (a)
ManyToMany
Tcrg-C4 37
  • 49 (a)
ManyToMany
oppossum
(Monodelphis domestica)
Mammalia -- 37
  • 30 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 37
  • 30 (a)
ManyToMany
-- 37
  • 31 (a)
ManyToMany
-- 37
  • 26 (a)
ManyToMany
chicken
(Gallus gallus)
Aves -- 37
  • 13 (a)
OneToMany
Species with no ortholog for TRGC1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for TRGC1 Gene

ENSEMBL:
Gene Tree for TRGC1 (if available)
TreeFam:
Gene Tree for TRGC1 (if available)

Paralogs for TRGC1 Gene

Paralogs for TRGC1 Gene

Selected SIMAP similar genes for TRGC1 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with TRGC1: view

Variants for TRGC1 Gene

Relevant External Links for TRGC1 Gene

HapMap Linkage Disequilibrium report
TRGC1

No data available for Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for TRGC1 Gene

Disorders for TRGC1 Gene

No disorders were found for TRGC1 Gene.

No data available for UniProtKB/Swiss-Prot for TRGC1 Gene

Publications for TRGC1 Gene

  1. Genetic polymorphism and exon changes of the constant regions of the human T-cell rearranging gene gamma. (PMID: 2879283) Lefranc M.P. … Rabbitts T.H. (Proc. Natl. Acad. Sci. U.S.A. 1986) 2 3 4
  2. T cell receptor gamma cDNA in human fetal liver and thymus: variable regions of gamma chains are restricted to V gamma I or V9, due to the absence of splicing of the V10 and V11 leader intron. (PMID: 8125127) Zhang X.M. … Huck S. (Eur. J. Immunol. 1994) 23
  3. The human T-cell receptor gamma (TRG) genes. (PMID: 2527426) Lefranc M.P. … Rabbitts T.H. (Trends Biochem. Sci. 1989) 3

Products for TRGC1 Gene

Sources for TRGC1 Gene

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