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Aliases for TRG-TCC6-1 Gene

Subcategory (RNA class) for TRG-TCC6-1 Gene

tRNA

Quality Score for this RNA gene is

2

Aliases for TRG-TCC6-1 Gene

  • Transfer RNA-Gly (TCC) 6-1 2 3
  • Transfer RNA Glycine 35 (Anticodon UCC) Pseudogene 2 3
  • TRNA-Gly-TCC-6-1 3
  • TRNAG35P 3

External Ids for TRG-TCC6-1 Gene

ORGUL Members for TRG-TCC6-1 Gene

Previous HGNC Symbols for TRG-TCC6-1 Gene

  • TRNAG35P

Previous GeneCards Identifiers for TRG-TCC6-1 Gene

  • GC18U901101

Summaries for TRG-TCC6-1 Gene

GeneCards Summary for TRG-TCC6-1 Gene

TRG-TCC6-1 (Transfer RNA-Gly (TCC) 6-1) is an RNA Gene, and is affiliated with the tRNA class.

Additional gene information for TRG-TCC6-1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRG-TCC6-1 Gene

Genomics for TRG-TCC6-1 Gene

GeneHancer (GH) Regulatory Elements for TRG-TCC6-1 Gene

Promoters and enhancers for TRG-TCC6-1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18I057677 Enhancer 0.4 ENCODE dbSUPER 550.8 -1.2 -1248 0.6 TRG-TCC5-1 TRG-TCC6-1 ENSG00000267787 ATP8B1
GH18I057678 Enhancer 0.2 dbSUPER 550.8 -0.7 -659 0.5 TRG-TCC5-1 TRG-TCC6-1 ENSG00000267787 ATP8B1
GH18I057693 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 +15.1 15116 1.6 SOX5 SOX13 TFAP4 SAP130 JUN ZNF644 RAD21 ZKSCAN1 SP1 FOSL1 RNU6-742P TRG-TCC6-1 LOC105372141 ENSG00000267787 ATP8B1
GH18I057683 Enhancer 0.5 ENCODE dbSUPER 0.8 +4.8 4770 0.7 HNF4A RNU6-742P RSL24D1P11 TRG-TCC6-1 ENSG00000267787 LOC105372141 ATP8B1
GH18I057711 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 +33.7 33698 2.5 HDGF ELF3 FOXA2 ARID4B DMAP1 ZNF48 RAD21 YY1 ZNF366 CREM LOC105372141 TRG-TCC6-1 ENSG00000267787 ATP8B1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around TRG-TCC6-1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for TRG-TCC6-1 Gene

Genomic Locations for TRG-TCC6-1 Gene
chr18:57,678,945-57,679,016
(GRCh38/hg38)
Size:
72 bases
Orientation:
Plus strand

Genomic View for TRG-TCC6-1 Gene

Genes around TRG-TCC6-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRG-TCC6-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRG-TCC6-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRG-TCC6-1 Gene

Proteins for TRG-TCC6-1 Gene

Post-translational modifications for TRG-TCC6-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRG-TCC6-1 Gene

Domains & Families for TRG-TCC6-1 Gene

Gene Families for TRG-TCC6-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRG-TCC6-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRG-TCC6-1 Gene

Function for TRG-TCC6-1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRG-TCC6-1 Gene

Localization for TRG-TCC6-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRG-TCC6-1 Gene

Pathways & Interactions for TRG-TCC6-1 Gene

SuperPathways for TRG-TCC6-1 Gene

No Data Available

Interacting Proteins for TRG-TCC6-1 Gene

Gene Ontology (GO) - Biological Process for TRG-TCC6-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRG-TCC6-1 Gene

Drugs & Compounds for TRG-TCC6-1 Gene

No Compound Related Data Available

Transcripts for TRG-TCC6-1 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for TRG-TCC6-1 Gene

No ASD Table

Relevant External Links for TRG-TCC6-1 Gene

GeneLoc Exon Structure for
TRG-TCC6-1
ECgene alternative splicing isoforms for
TRG-TCC6-1

No data available for mRNA/cDNA for TRG-TCC6-1 Gene

Expression for TRG-TCC6-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRG-TCC6-1 Gene

Orthologs for TRG-TCC6-1 Gene

No data available for Orthologs and Evolution for TRG-TCC6-1 Gene

Paralogs for TRG-TCC6-1 Gene

No data available for Paralogs for TRG-TCC6-1 Gene

Variants for TRG-TCC6-1 Gene

Additional Variant Information for TRG-TCC6-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRG-TCC6-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRG-TCC6-1 Gene

Disorders for TRG-TCC6-1 Gene

No disorders were found for TRG-TCC6-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRG-TCC6-1 Gene

Publications for TRG-TCC6-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 58

Products for TRG-TCC6-1 Gene

Sources for TRG-TCC6-1 Gene

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