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Aliases for TRG-TCC6-1 Gene

Subcategory (RNA class) for TRG-TCC6-1 Gene

tRNA

Quality Score for this RNA gene is

2

Aliases for TRG-TCC6-1 Gene

  • Transfer RNA-Gly (TCC) 6-1 2 3
  • Transfer RNA Glycine 35 (Anticodon UCC) Pseudogene 2 3
  • TRNA-Gly-TCC-6-1 3
  • TRNAG35P 3

External Ids for TRG-TCC6-1 Gene

ORGUL Members for TRG-TCC6-1 Gene

Previous HGNC Symbols for TRG-TCC6-1 Gene

  • TRNAG35P

Previous GeneCards Identifiers for TRG-TCC6-1 Gene

  • GC18U901101

Summaries for TRG-TCC6-1 Gene

GeneCards Summary for TRG-TCC6-1 Gene

TRG-TCC6-1 (Transfer RNA-Gly (TCC) 6-1) is an RNA Gene, and is affiliated with the tRNA class.

Additional gene information for TRG-TCC6-1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRG-TCC6-1 Gene

Genomics for TRG-TCC6-1 Gene

Regulatory Elements for TRG-TCC6-1 Gene

Enhancers for TRG-TCC6-1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH18H057693 1.2 Ensembl ENCODE dbSUPER 0.4 +15.1 15116 1 SOX5 SOX13 TFAP4 SAP130 JUN RAD21 ZNF644 ZKSCAN1 FOSL1 JUND RNU6-742P TRG-TCC6-1 LOC105372141
GH18H057683 0.6 ENCODE dbSUPER 0.7 +4.8 4771 0 HNF4A RNU6-742P RSL24D1P11 TRG-TCC6-1 LOC105372141
GH18H057711 1.4 Ensembl ENCODE dbSUPER 0.3 +33.7 33699 2 ELF3 HDGF TBP FOXA2 ATF1 ARID4B DMAP1 RAD21 YY1 ZNF366 LOC105372141 TRG-TCC6-1
GH18H057698 1.2 Ensembl ENCODE dbSUPER 0.3 +20.0 20036 1 INSM2 ZBTB8A ZNF843 OSR2 ZNF664 ZNF121 ZSCAN21 PRDM6 ZNF366 ZBTB48 RNU6-742P TRG-TCC6-1 LOC105372141
GH18H057727 1.1 Ensembl ENCODE dbSUPER 0.2 +50.2 50154 3 GATA3 JUND JUN ELF1 FOS DPF2 NR2F2 RNU6-742P HMGN1P30 LOC105372141 TRG-TCC6-1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRG-TCC6-1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRG-TCC6-1 Gene

Chromosome:
18
Start:
57,678,945 bp from pter
End:
57,679,016 bp from pter
Size:
72 bases
Orientation:
Plus strand

Genomic View for TRG-TCC6-1 Gene

Genes around TRG-TCC6-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRG-TCC6-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRG-TCC6-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRG-TCC6-1 Gene

Proteins for TRG-TCC6-1 Gene

Post-translational modifications for TRG-TCC6-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRG-TCC6-1 Gene

Domains & Families for TRG-TCC6-1 Gene

Gene Families for TRG-TCC6-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRG-TCC6-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRG-TCC6-1 Gene

Function for TRG-TCC6-1 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TRG-TCC6-1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRG-TCC6-1 Gene

Localization for TRG-TCC6-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for TRG-TCC6-1 Gene

Pathways & Interactions for TRG-TCC6-1 Gene

SuperPathways for TRG-TCC6-1 Gene

No Data Available

Interacting Proteins for TRG-TCC6-1 Gene

Gene Ontology (GO) - Biological Process for TRG-TCC6-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRG-TCC6-1 Gene

Drugs & Compounds for TRG-TCC6-1 Gene

No Compound Related Data Available

Transcripts for TRG-TCC6-1 Gene

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for TRG-TCC6-1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for TRG-TCC6-1 Gene

No ASD Table

Relevant External Links for TRG-TCC6-1 Gene

GeneLoc Exon Structure for
TRG-TCC6-1
ECgene alternative splicing isoforms for
TRG-TCC6-1

No data available for mRNA/cDNA for TRG-TCC6-1 Gene

Expression for TRG-TCC6-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for TRG-TCC6-1 Gene

Orthologs for TRG-TCC6-1 Gene

No data available for Orthologs and Evolution for TRG-TCC6-1 Gene

Paralogs for TRG-TCC6-1 Gene

No data available for Paralogs for TRG-TCC6-1 Gene

Variants for TRG-TCC6-1 Gene

Relevant External Links for TRG-TCC6-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRG-TCC6-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRG-TCC6-1 Gene

Disorders for TRG-TCC6-1 Gene

No disorders were found for TRG-TCC6-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRG-TCC6-1 Gene

Publications for TRG-TCC6-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan PP … Lowe TM (Nucleic acids research 2009) 3 60

Products for TRG-TCC6-1 Gene

Sources for TRG-TCC6-1 Gene

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