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Aliases for TRG-CCC5-1 Gene

Subcategory (RNA class) for TRG-CCC5-1 Gene

tRNA

Quality Score for this RNA gene is

2

Aliases for TRG-CCC5-1 Gene

  • Transfer RNA-Gly (CCC) 5-1 2 3
  • Transfer RNA Glycine 10 (Anticodon CCC) 2 3
  • TRNA-Gly-CCC-5-1 3
  • TRNAG10 3

External Ids for TRG-CCC5-1 Gene

ORGUL Members for TRG-CCC5-1 Gene

Previous HGNC Symbols for TRG-CCC5-1 Gene

  • TRNAG10

Summaries for TRG-CCC5-1 Gene

GeneCards Summary for TRG-CCC5-1 Gene

TRG-CCC5-1 (Transfer RNA-Gly (CCC) 5-1) is an RNA Gene, and is affiliated with the tRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for TRG-CCC5-1 Gene

Genomics for TRG-CCC5-1 Gene

Regulatory Elements for TRG-CCC5-1 Gene

Enhancers for TRG-CCC5-1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F016727 1.1 ENCODE 0.8 +0.5 516 0.2 HDGF PKNOX1 CREB3L1 SIN3A ZNF2 YY1 ZNF143 ZNF548 ZNF263 MCM3 ENSG00000237938 SPEN FAM231A RPS16P1 RPL22P3 LOC100421279 RNU1-1 ENSG00000236648 ZBTB17 NBPF1
GH01F016729 1.1 ENCODE 0.8 +0.1 56 0.2 CREB3L1 SIN3A ZNF2 YY1 ZNF143 KLF13 ZNF263 SP3 NFYC JUNB ENSG00000237938 SPEN MFAP2 ENSG00000224621 RPS16P1 RCC2 TRG-CCC5-1 FAM231C
GH01F016730 1.1 ENCODE 0.8 +0.3 256 0.2 HDGF PKNOX1 CREB3L1 ARID4B SIN3A FEZF1 ZNF2 YY1 ZNF143 ZNF548 ENSG00000237938 RPS16P1 SPEN MFAP2 RPL22P3 ENSG00000224621 ZBTB17 NBPF1 LINC01772 RCC2
GH01F016728 0.9 Ensembl 0.8 +1.3 1301 0.8 INSM2 BMI1 ZNF2 ZNF335 ZNF121 SCRT2 KLF7 SMARCA5 MIER1 YY2 FAM231A LOC100421279 RNU1-1 ENSG00000236648 SPATA21 TRG-CCC5-1 FAM231C
GH01F016732 0.9 Ensembl 0.4 +5.6 5616 1.4 ATF1 PKNOX1 KLF17 ZNF2 ZBTB40 RAD21 ZNF143 EGR2 ZNF263 ZNF654 RPL22P3 FAM231C TRG-CCC5-1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around TRG-CCC5-1 on UCSC Golden Path with GeneCards custom track

Genomic Location for TRG-CCC5-1 Gene

Chromosome:
1
Start:
16,727,285 bp from pter
End:
16,727,355 bp from pter
Size:
71 bases
Orientation:
Plus strand

Genomic View for TRG-CCC5-1 Gene

Genes around TRG-CCC5-1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
TRG-CCC5-1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for TRG-CCC5-1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for TRG-CCC5-1 Gene

Proteins for TRG-CCC5-1 Gene

Post-translational modifications for TRG-CCC5-1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for TRG-CCC5-1 Gene

Domains & Families for TRG-CCC5-1 Gene

Gene Families for TRG-CCC5-1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with TRG-CCC5-1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for TRG-CCC5-1 Gene

Function for TRG-CCC5-1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for TRG-CCC5-1 Gene

Localization for TRG-CCC5-1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for TRG-CCC5-1 Gene

Pathways & Interactions for TRG-CCC5-1 Gene

SuperPathways for TRG-CCC5-1 Gene

No Data Available

Interacting Proteins for TRG-CCC5-1 Gene

Gene Ontology (GO) - Biological Process for TRG-CCC5-1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for TRG-CCC5-1 Gene

Transcripts for TRG-CCC5-1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for TRG-CCC5-1 Gene

No ASD Table

Relevant External Links for TRG-CCC5-1 Gene

GeneLoc Exon Structure for
TRG-CCC5-1
ECgene alternative splicing isoforms for
TRG-CCC5-1

No data available for mRNA/cDNA for TRG-CCC5-1 Gene

Expression for TRG-CCC5-1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for TRG-CCC5-1 Gene

Orthologs for TRG-CCC5-1 Gene

No data available for Orthologs and Evolution for TRG-CCC5-1 Gene

Paralogs for TRG-CCC5-1 Gene

No data available for Paralogs for TRG-CCC5-1 Gene

Variants for TRG-CCC5-1 Gene

Relevant External Links for TRG-CCC5-1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
TRG-CCC5-1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for TRG-CCC5-1 Gene

Disorders for TRG-CCC5-1 Gene

No disorders were found for TRG-CCC5-1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for TRG-CCC5-1 Gene

Publications for TRG-CCC5-1 Gene

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. (PMID: 18984615) Chan P.P. … Lowe T.M. (Nucleic Acids Res. 2009) 3 64

Products for TRG-CCC5-1 Gene

Sources for TRG-CCC5-1 Gene

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